Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3019 ATGCCTGGTGCTGCTGCAAAACTGAAGGGGTCTGAGGGCAGTGTAGATGAGATGAAATCGGAAGAGAAAGTAGATACCTTAGTCAGACATGCATTTGGCAGAGAATCCTTTCTCTATTTTCCTACAAGGCCCACTGAAAACCCTACACAGTGGATTCAATTACTTCATACTTTGGATCACCAAGAACTTCCAGGGTGGCCTTTGCTCTTTCCAATGAAGGTTCAGTTGCAGAAGTGTGACAAATGTTCTCAAGAGTTTTGCTCCTCCATTAATTATAGAAGACATATACGTGTGCACCACCGATTGAAAAAGCTCGATAAGGACTCTACAAAAAATTTGGATCTTTTAGGAGCATATTGGGATAAGCTCTCTGTAGAAGAGGCAAAGGAAGTTGTATCATTAAAAGATGTGATGCTGGAGGGAGTTCCAGGATCTTTAATTTTAGAAGCTTTGACAACTCTTCTTCAAAATCCAGGATTTCCTTCATTGCCATTCCATTATCTGAGGGCTGGTGCTGCCCTTTTGGATATTGTTCAATCTAAACCTTCCAGGTTTCCCTTATCTTCCCAGGAATTGTTCACTATCCTCGACGATGCTAGTGAAAAAACATGTTTATGTGGGACAGCAGTGTCAATGCAAAGATATATTTTTGATGGAGAGGCTGGAAAAGTTGGCCTTGAACCGAGGAATTTAGTTGCCTGCACAAGTTTCTTGCTAGAGCAGAAATTGGTGAAGGCATGGCTTGCAGACAAGGATGCTGAAGCCTTGAGGTGCCAGAGGCAGTTGGTGGAGGAGGAAGAAGCTGCTCATAAAAGGCAAGCTAAGATATCGGAGAGGAAACGCCAGAAGAAGCTTAGACAAAAAGACCAGAAGGCAAGGGAACAAAGGCATGAGGAAGAAATTAAAGGGAACATTGACAGCACGGTGGATGCCTCATCAGCAGCAGAAGCATCTTTGGGTACTCTTGATTTTGAAGCACATAATCCAGAGACTTTTGCAGATAGCACTCCTTCACATGTTCTGTTCCATTGCCCTGACAGTAATGAAGGAATAGATGGGAATGTTCATTCAGAGTATGATTTTGGCATTGATCAGAATATTGAGCGACCACCAGCACGTCAACATAATCATCAACAAACAGCAGTTGCCAGACGGCAGGGGCTGCCAAAATCACAATGGGCTGTAACCAATGGTTTGCATGCATGCCAGAATTCTCCAATTTCAAAGATTGAAGTGATTCAGATATATGGGACCCACTCTGATAAGAGGGCTGCCACTATAGTTAATGGTAGTAAAGTATGGAGTCAAAAGTCGAAACCAGAAATTGACAGAATAGTTTCAGAAGCCAGATTAGAGAAAGAACTAGACCAAGTTAAGAATCATGAAGTTTTGATAGGATCTATATCTATTACTCTAGGCAATTGCAGCCAATCAGAGGGTATGGCGGTGGCATCGGGAGAGGACTGCAGCGTTGAGAATTTGACCAACAAGAATAGTTGTCAGGAGAAGCCGCTGAATCCTGATCTTGTCCAGAGTGGCAACAATTGGTTAACCAAGCATTGGAGGCCGGTTAGCCAGCATGGAACCGAAAATCCAGTTCCAGTTCAAAGTGGTGAGGCAAAAGCTGATTCAAGTTATGGAAATGGAGATTGTCAAAGCTTGTCAGATCCAAGTTGCTTAAGGTCATGCAGTACAGATGGTAGTGGTATTGGTTTTGAAAACAACTTTTCCCATGTAGAGTGCAGAGTGGGTCCAGGAAGCTTACGGTTATCCAGTCATACGGCAAAAGCCTTTCTTGCACAAAGATGGAAAGAAGCGATTGCATCAAATCACTTGGAGTTGATAATTTCCTCCGACTCTGAACCTCCTGGATGGCAGGAGATACAGGATACTAGAATAGCAGAATGCCAATCATCTGAGGTTGACAAATGCAACATTCTCGCCCATGCAGAGAACTGGTTTTCTGCAACCTCCAAAGTTACTAACACCAAACCCAGAATGAAGCCTGAAAAGGGAATGAAAATAAAATATGCACAGTTTGACTTGTTGCCAATTAATTTGTTAGCAGAGGTTCCAGTTTTACAAGATGGTCTTCTGTCAGAGTATCGAAGGTGGGGTTGGTCCACTGGCTATCATATTAGCCTCCCAAAAGAACATGAGATCGATTACAAAGAACAGCAAGACCAATCACTTAAGAATCTGCAAAATAAGCCTTGCACATCACGCAAAGTTGGTTTCCTCTCTTTCAGTCAGCTCAATTCCCTGGCCGTGGTAATTGTCTTATCTGCCAGTGGCATGGTCAGCCCTGAAGACTTCGCTTTTGTGTTGTTCTCTCTAATTTACATGTACTTCATATCCAAGGTGGCCTTCCCACCTCTTCACCAATCAAAGGAACCCTCAATATTCAACCCGCAAGGCAGGCTTCTTCGCCTTTATCTGTTCATAGGGACCATCATTGGACTTTAG 2466 0.4319 MPGAAAKLKGSEGSVDEMKSEEKVDTLVRHAFGRESFLYFPTRPTENPTQWIQLLHTLDHQELPGWPLLFPMKVQLQKCDKCSQEFCSSINYRRHIRVHHRLKKLDKDSTKNLDLLGAYWDKLSVEEAKEVVSLKDVMLEGVPGSLILEALTTLLQNPGFPSLPFHYLRAGAALLDIVQSKPSRFPLSSQELFTILDDASEKTCLCGTAVSMQRYIFDGEAGKVGLEPRNLVACTSFLLEQKLVKAWLADKDAEALRCQRQLVEEEEAAHKRQAKISERKRQKKLRQKDQKAREQRHEEEIKGNIDSTVDASSAAEASLGTLDFEAHNPETFADSTPSHVLFHCPDSNEGIDGNVHSEYDFGIDQNIERPPARQHNHQQTAVARRQGLPKSQWAVTNGLHACQNSPISKIEVIQIYGTHSDKRAATIVNGSKVWSQKSKPEIDRIVSEARLEKELDQVKNHEVLIGSISITLGNCSQSEGMAVASGEDCSVENLTNKNSCQEKPLNPDLVQSGNNWLTKHWRPVSQHGTENPVPVQSGEAKADSSYGNGDCQSLSDPSCLRSCSTDGSGIGFENNFSHVECRVGPGSLRLSSHTAKAFLAQRWKEAIASNHLELIISSDSEPPGWQEIQDTRIAECQSSEVDKCNILAHAENWFSATSKVTNTKPRMKPEKGMKIKYAQFDLLPINLLAEVPVLQDGLLSEYRRWGWSTGYHISLPKEHEIDYKEQQDQSLKNLQNKPCTSRKVGFLSFSQLNSLAVVIVLSASGMVSPEDFAFVLFSLIYMYFISKVAFPPLHQSKEPSIFNPQGRLLRLYLFIGTIIGL* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3019 821 MobiDBLite consensus disorder prediction 1 20 - -
Dod02g3019 821 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 6 678 - -
Dod02g3019 821 MobiDBLite consensus disorder prediction 524 556 - -
Dod02g3019 821 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
Dod02g3019 821 ProSitePatterns Zinc finger C2H2 type domain signature. 79 100 IPR013087 -
Dod02g3019 821 Coils Coil 253 273 - -
Dod02g3019 821 MobiDBLite consensus disorder prediction 270 312 - -
Dod02g3019 821 MobiDBLite consensus disorder prediction 288 305 - -
Dod02g3019 821 MobiDBLite consensus disorder prediction 541 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3019 Dod-Chr2 63778808 63789169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3019 22 684 C2H2 Transcription Factor Family AT4G25610 38.657 3.27e-131 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod02g3019 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3019 - - gmx:100809067 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3019 02 63778808 63789169 Dod02g3019 02 63778808 63789169 ECH
Dod02g3019 02 63778808 63789169 Dod06g0811 06 10115607 10121967 PCT