Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2991 ATGCTGTCTCAGTCAGCCTGCCTCCACCACCTCGACGTCCTCAATGTCGCCCGCTCTGTTGTCAACCGCGACTCCACAGCCCGCAAGCTTTTCATCCACGGCTTTGCCGCCCAGACCACCACTGACACCTTCCGCTCCGTCTTCTCCGCCTTCAACAACCTCCACGAGACCAATGCCATCTTCAACAAGAACACTAGAAAATCCATGGGCTACGGCTTCGTCACGTTCACCCACGTCAACTGTGCCTTCCTTGCCCTCAAGGATCCTAACAAGAAGATCGACAGCTGCATGACAGTCACCCAGATCGCCGCCACCGGAGGCCCCAGCGCAGCCACCGCCGTCGCCACTGACATCGCTGCACAGAAGGTCGAAGAGGGTGCGATGGCTTGTTTGGCAGAGCCTATGAAGATCATTGATGGGTTCCATCTGTTTTGCAAGTTGGCTGTGGATGTCAAGAAGGCAAAGCCACAGAGCCCTGCTTTTGGGTTTGCAGGGGATGCTACCATGCATGTTCAGCAGCAACATCAACATTAA 534 0.5562 MLSQSACLHHLDVLNVARSVVNRDSTARKLFIHGFAAQTTTDTFRSVFSAFNNLHETNAIFNKNTRKSMGYGFVTFTHVNCAFLALKDPNKKIDSCMTVTQIAATGGPSAATAVATDIAAQKVEEGAMACLAEPMKIIDGFHLFCKLAVDVKKAKPQSPAFGFAGDATMHVQQQHQH* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2991 177 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 28 95 IPR000504 GO:0003723
Dod02g2991 177 PANTHER GEO13361P1-RELATED 122 166 - -
Dod02g2991 177 PANTHER GEO13361P1-RELATED 3 123 - -
Dod02g2991 177 SMART rrm1_1 29 100 IPR000504 GO:0003723
Dod02g2991 177 Gene3D - 19 106 IPR012677 -
Dod02g2991 177 SUPERFAMILY RNA-binding domain, RBD 27 107 IPR035979 GO:0003676
Dod02g2991 177 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 30 92 IPR000504 GO:0003723
Dod02g2991 177 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 122 166 - -
Dod02g2991 177 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 3 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2991 Dod-Chr2 63486098 63486779 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2991 22 104 C2H2 Transcription Factor Family AT2G19380 31.325 1.84e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2991 K12741 - gmx:100804230 150.599