Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2986 ATGGTATCCAAAAATCCAAACCCGCCCGATGTCTTCTACTTGGACCCCACAGGCGTCGCCCTCCCTGGTCTCGCACCCTTCGCCTCCCTCTCCTCCGCCGCCACGGAGGACGCCGGAAAGAAGATCCGGAAGCCGTACACCATCACGAAGTCGAGGGAGAATTGGACCGAACCCGAGCACGACAAGTTCCTCGAAGCTCTTCAACTGTTTGACCGTGACTGGAAAAAGATTGGAGCATTTGTTGGATCAAAGACAGTTATTCAGATTCGTAGCCATGCGCAGAAATACTTTTTAAAAGTTCAGAAGAGTGGGACAAGTGAACATCTTCCTCCACCCAGGCCAAAAAGAAAAGCGGCCCATCCTTATCCTCAGAAAGCTCCCAAAAATGCTCCTGTACTCTCACAACTATCTGGATCTTTTCAATCTTCATCTGCTTTGCTCGAAGCTGGATATATCCTTAATCATGACTCCTCAGCAATGCTTAAAACTCCTATTATGGACTCTGTGGTGTCTTCCTGGTCAAACACCACCTTGCAAACAACTAATTTACCCCATGTGCCAAAAAAGAATAATTTGTCATGTAGCAGTGAAAGCACTCCTAGAGTGCAGCCAGCTGGTCAATCTAATGGTCAAGGGAATAATGGCTATCCATTGAGGGTCCTTCCAGATTTCACTCAAGTATACAGCTTTATTGGCAGTGTATTTGACCCAGATGCAGCTGATCATCTACAGAAACTGAAAAATATGGACCGTATAGATGTTGAGACGGTGCTACTGTTGATGAGAAACCTGTCTATCAACTTGACTAGCCCAGATTTTGAGGATCAACCTCTTGACTATTGTGCATGCAATCCATGCAGAAAAAGCTGCTTTCATCATATGAGGTGGAGACAGATAACATCAATCCAGATAGACCCATGCACCATGAGCAGTTGA 936 0.4594 MVSKNPNPPDVFYLDPTGVALPGLAPFASLSSAATEDAGKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIGAFVGSKTVIQIRSHAQKYFLKVQKSGTSEHLPPPRPKRKAAHPYPQKAPKNAPVLSQLSGSFQSSSALLEAGYILNHDSSAMLKTPIMDSVVSSWSNTTLQTTNLPHVPKKNNLSCSSESTPRVQPAGQSNGQGNNGYPLRVLPDFTQVYSFIGSVFDPDAADHLQKLKNMDRIDVETVLLLMRNLSINLTSPDFEDQPLDYCACNPCRKSCFHHMRWRQITSIQIDPCTMSS* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2986 311 ProSiteProfiles Myb-like domain profile. 47 97 IPR001005 -
Dod02g2986 311 MobiDBLite consensus disorder prediction 181 214 - -
Dod02g2986 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 47 101 IPR017930 -
Dod02g2986 311 Pfam Myb-like DNA-binding domain 52 97 IPR001005 -
Dod02g2986 311 PANTHER PROTEIN REVEILLE 6 3 276 - -
Dod02g2986 311 ProSiteProfiles SANT domain profile. 50 101 IPR017884 -
Dod02g2986 311 PANTHER SWI/SNF COMPLEX-RELATED 3 276 - -
Dod02g2986 311 SUPERFAMILY Homeodomain-like 46 102 IPR009057 -
Dod02g2986 311 MobiDBLite consensus disorder prediction 102 130 - -
Dod02g2986 311 Gene3D - 54 102 - -
Dod02g2986 311 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 50 99 IPR006447 GO:0003677
Dod02g2986 311 SMART sant 51 99 IPR001005 -
Dod02g2986 311 CDD SANT 54 97 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2986 Dod-Chr2 63451768 63457856 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod02g2986 Myb_DNA-binding 1.6e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2986 - - gmx:100783949 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2986 02 63451768 63457856 Dod06g0836 06 10428457 10434190 ECH
Dod02g2986 02 63451768 63457856 Dod02g2986 02 63451768 63457856 ECH
Dod02g2986 02 63451768 63457856 Dod06g0836 06 10428457 10434190 PCT