Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2973 ATGGGTCATGAAGATTGGGATCTCTCTGCCATCGTTCGAAGCTGCAAAGCTCCTAACACCAACAGCAACAACGCTGAAGAAGCTCCAACAAACTCCCACACTGGATTATTATTCCCTCAAGACACTAGTAGTGCTAATAATGCCCCATTTTCTTCTTTTCCCAATCTTATGCAATCGAGGACCAATGCGTTCCAAGAGCTACACCAATTGCTCGAGGCCTTTAACCCCACCACCACAGCCACCACTAGCACTAGTGCCCCTGGTGGCATCAATATTCCAAATTCTCCCCCTTTTCCCGATTTCAGGCCAGGATCCATTGCACAACACCACCATCATTCTCCATCTGTGCTTGTTCCCACAACTAATTACACCTCCATTGGAGCCTCCACTTCTGCTAATTTTGACAGATTCCACCACCAACAACAACAACATCATCAACAACATCAACAGCAGCAACCACAACCCCAAGAACAAAAGGAGCACAATCAAGCACAAGTTCAAGTACCCCAAACAAGTTCCGTGGCCTTATTACCAAACACACAATCATCACAAAAACCCAGATCAAGAAAAAGAAAAAGCCTACAGAAGAAAATGGTGTGCCATGTAACTGCAGATAACCTCTCAGCAGATTTATGGGCATGGCGAAAATACGGACAGAAACCCATCAAAGGCTCCCCATATCCAAGAAACTACTACAGATGCAGCAGCTGCAAAGGTTGTGTGGCAAGAAAGCAAGTTGAACGAAGCTTAACCGATCCAGGAATGTTCGTGGTTACATACACCGGGGAACACAGGCACGCGAAACCGGTGCACCGGAATTCCCTAGCCGGCAGTACACGGAATAAGACCACCGGATCCGCCACCACGACGACACAACCCGATCCGCATTCGAAACCTGAAACCTCCATGAACTCATCTAATTTTTCGCAAGTTTCGACTCAAACGACGACGAGCCATCAAGAGGATGTTGTGTCTGGTCCAGCCGAAGATTCTTGGAGAGAGGGTGACCGAGTAACGGAACAAGAACTGGACTCATTGGAGGAAGAAGATGACGAGGATGATGTTCTGATTCCGAACGACACTGCTGCATTGTCGGACACAGTGTTCTTGGATCCTATCACCTTCACTGCAGAAGCTGGTGTCGGTAAAACCAGCCCCGGGTTAAAAAACAGGTCGGATCCCAGCACCAAACCCGATTGA 1200 0.4792 MGHEDWDLSAIVRSCKAPNTNSNNAEEAPTNSHTGLLFPQDTSSANNAPFSSFPNLMQSRTNAFQELHQLLEAFNPTTTATTSTSAPGGINIPNSPPFPDFRPGSIAQHHHHSPSVLVPTTNYTSIGASTSANFDRFHHQQQQHHQQHQQQQPQPQEQKEHNQAQVQVPQTSSVALLPNTQSSQKPRSRKRKSLQKKMVCHVTADNLSADLWAWRKYGQKPIKGSPYPRNYYRCSSCKGCVARKQVERSLTDPGMFVVTYTGEHRHAKPVHRNSLAGSTRNKTTGSATTTTQPDPHSKPETSMNSSNFSQVSTQTTTSHQEDVVSGPAEDSWREGDRVTEQELDSLEEEDDEDDVLIPNDTAALSDTVFLDPITFTAEAGVGKTSPGLKNRSDPSTKPD* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2973 399 Gene3D WRKY domain 192 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod02g2973 399 MobiDBLite consensus disorder prediction 326 340 - -
Dod02g2973 399 MobiDBLite consensus disorder prediction 341 357 - -
Dod02g2973 399 MobiDBLite consensus disorder prediction 78 123 - -
Dod02g2973 399 ProSiteProfiles WRKY domain profile. 203 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g2973 399 MobiDBLite consensus disorder prediction 17 54 - -
Dod02g2973 399 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 371 IPR044810 GO:0003700
Dod02g2973 399 SUPERFAMILY WRKY DNA-binding domain 204 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod02g2973 399 MobiDBLite consensus disorder prediction 267 399 - -
Dod02g2973 399 MobiDBLite consensus disorder prediction 274 324 - -
Dod02g2973 399 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 4 371 - -
Dod02g2973 399 SMART WRKY_cls 208 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g2973 399 MobiDBLite consensus disorder prediction 137 197 - -
Dod02g2973 399 Pfam WRKY DNA -binding domain 210 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g2973 399 MobiDBLite consensus disorder prediction 144 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2973 Dod-Chr2 63303953 63305740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2973 147 302 WRKY Transcription Factor Family AT5G52830 57.576 1.20e-52 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod02g2973 WRKY 6.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2973 K13425 - aprc:113866622 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2771 04 51695071 51696602 Dod02g2973 02 63303953 63305740 ECH
Dod02g2973 02 63303953 63305740 Dod02g2973 02 63303953 63305740 ECH
Dod02g2973 02 63303953 63305740 Dod06g0843 06 10484509 10486246 PCT