Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2959 ATGGAACAGAAGCATGTTCTGTTGTCTGCATTGAGTGTTGGGGTTGGGTTGGGAGTGGGGCTTGGGTTGAGCACAGGTCAGAAATGGGTTAGAGGAAACCGTGAGTCTGATGAGATTTCTGGGGACCAGATTGTACAGGAGCTCAAGAGGGTGGTGATTGATGGCAAGGACACCAGGGTCACATTTGATGACTTCCCTTATTACTTGAGTGAGAAAACTCGAGTTTTGTTGACGAGTGCTGCATATGTTCATTTAAAACATCTTCACTTTTCCAAGCACACTAGGAACCTCTCACCGGCAAGCAGGGCTATTTTGCTCTCTGGTCCTGCAGAACTTTACCAGCAAATGCTTGCCAGAGCTTTAGCACATTACTTTGAATCAAAGTTGCTGTTGCTAGATATTACTGACTTCTCGGTGAAGATGCAGAGCAAATATGGATGTTCTAGAAAAGAACCATGTTTGAAAAGGTCTATATCTGAGCTGACTTTCGAGCGAATGTCTGGTTTGTTTGGTTCCTTTTCAATCCTCCCTTCAACTGCTGAAACTACAGGCACTCTACGTTGTCAACAAAGTGTTGCTATTGCAAGTTCGAACAATCCTTCAAAGCTCCGGAGGAATGCCTCTGCTGCATCTGATATAAGTAGTGCTACTTCCGAGTGTGGTCCAACAAATCCAGCTCCTTTAAAGCGCACAAGTAGCTTGTGTTTTGATGAAAAGCTCTTTGTGCAGTCACTTTACAAGGTTTTGGTTTCTATATCAGAAACTGGTTCCATCATTTTATACATCAGAGATGTTGAGAAGCTCATTCTTCAATCACCAAGATTATACAATTTTTTACAAAAAATGATAAAGAAAATTTCAGGATCGGCGTTAATAATCGGTTCTCAGATAATAGATATAGAAGATGATAGCAGAGAAGTTGATGAAAGACTCAGTATGTTATTCCCATACAACATTGACGTCAATCCTCCTGAAGATGCTACTCAGCTTAGCTGCTGGAAAGCCCTTCTAGAAGAGGACATGAAAGATATTCAATTTCAAGATAACAAAAACCACATTGCTGAAGTACTTGCAGCAAATGACATTGATTGTGATGACTTGTCATCAATCTGCCATGCAGACACTATGGTACTCAGTAATTATATTGAAGAAATTGTGGTATCAGCAATATCTTACCATTTGATGAATACCAAGGATCCAGAATACAAAAATGGAAAGCTAGTTATATCAGCCAACAGTTTGTCCCATGGATTGAATCTATTCCAGGGAGGCAAGAGTAGTGGGAATCTGAAGACTAATGATCCTAATGAGGAAAATGCTCGAGAAGATATTACTAGTACAAAGAATGATGTGCGGTGTGACAACCAAGCACCTGAAAACAAAAGTGAGACAGAGAAATCTATTCCTGTAATAAAGAAAGATGGTGAAAATCCTGCTCCGGCAAAAGCAGAAGTTCCTGACAATGAGTTTGAAAGACGCATAAGACCAGAAGTCATCCTTGCAAATGAGATAGGGGTTACATTCGTAGATATTGGTGCATTGGATGAGATTAAAGATTCACTTCAAGAGCTGGTCATGCTTCCCCTTCGAAGACCGGACCTCTTCAAAGGTGGTCTTTTGAAGCCATGTAGAGGTATATTGCTCTTTGGACCTCCTGGGACTGGAAAGACAATGCTAGCAAAGGCAATTGCCAATGAAGCTGGAGCAAGTTTCATCAATGTCTCAATGTCCACCATCACTTCAAAATGGTTTGGAGAAGATGAAAAGAATGTCAGAGCTCTGTTCACACTAGCAGCAAAGGTTGCTCCAACTATCATCTTCGTTGATGAGGTTGACAGCATGCTTGGGCAGCGGACCAGAGTTGGAGAGCATGAAGCCATGAGGAAGATTAAGAATGAGTTCATGACTCACTGGGATGGTCTGTTGACAAGACCTGGTGAGCAAATTCTGGTTCTTGCTGCAACTAACAGGCCTTTTGACCTTGATGAAGCAATTATAAGACGGTTTGAGCGCAGGATTATGGTTGGTCTTCCCTCTGCTGAGAATAGGGAAATGATCCTGAAAACTCTCCTAGCAAAGGAAAAACATGAAAACTTAGACTTCAAAGAGCTTGCATCCATGACAGAAGGATATAGTGGAAGTGACCTTAAGAATTTGTGCATCACTGCAGCTTATCGACCTGTTAGGGAGCTACTACAACAGGAGAAAATGAAGGATATGGAAAAGAAGAAAAAAGAGGCTGAAGGCCAAAGCTCTGAAGATGCTTCGAATAATAAAGCAGATCAACAAATTATCCTGAGGTCCTTAAACATGGAAGACATGAGACAAGCAAAGAGTCAGGTGGCTGCAAGTTTTGCTGCAGAAGGGTCAGTAATGAATGAGCTGAAGCAGTGGAATGAGTTATATGGAGAAGGAGGTTCAAGGAGGAAACAACAACTCACTTACTTCCTTTAG 2454 0.4161 MEQKHVLLSALSVGVGLGVGLGLSTGQKWVRGNRESDEISGDQIVQELKRVVIDGKDTRVTFDDFPYYLSEKTRVLLTSAAYVHLKHLHFSKHTRNLSPASRAILLSGPAELYQQMLARALAHYFESKLLLLDITDFSVKMQSKYGCSRKEPCLKRSISELTFERMSGLFGSFSILPSTAETTGTLRCQQSVAIASSNNPSKLRRNASAASDISSATSECGPTNPAPLKRTSSLCFDEKLFVQSLYKVLVSISETGSIILYIRDVEKLILQSPRLYNFLQKMIKKISGSALIIGSQIIDIEDDSREVDERLSMLFPYNIDVNPPEDATQLSCWKALLEEDMKDIQFQDNKNHIAEVLAANDIDCDDLSSICHADTMVLSNYIEEIVVSAISYHLMNTKDPEYKNGKLVISANSLSHGLNLFQGGKSSGNLKTNDPNEENAREDITSTKNDVRCDNQAPENKSETEKSIPVIKKDGENPAPAKAEVPDNEFERRIRPEVILANEIGVTFVDIGALDEIKDSLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTRPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREMILKTLLAKEKHENLDFKELASMTEGYSGSDLKNLCITAAYRPVRELLQQEKMKDMEKKKKEAEGQSSEDASNNKADQQIILRSLNMEDMRQAKSQVAASFAAEGSVMNELKQWNELYGEGGSRRKQQLTYFL* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2959 817 Pfam ATPase family associated with various cellular activities (AAA) 546 676 IPR003959 GO:0005524|GO:0016887
Dod02g2959 817 MobiDBLite consensus disorder prediction 424 488 - -
Dod02g2959 817 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 506 753 IPR027417 -
Dod02g2959 817 MobiDBLite consensus disorder prediction 737 761 - -
Dod02g2959 817 MobiDBLite consensus disorder prediction 737 752 - -
Dod02g2959 817 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 817 - -
Dod02g2959 817 Gene3D - 678 754 - -
Dod02g2959 817 ProSitePatterns AAA-protein family signature. 649 668 IPR003960 GO:0005524|GO:0016887
Dod02g2959 817 SMART AAA_5 542 679 IPR003593 -
Dod02g2959 817 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 817 - -
Dod02g2959 817 Pfam AAA+ lid domain 698 742 IPR041569 -
Dod02g2959 817 CDD AAA 544 677 - -
Dod02g2959 817 MobiDBLite consensus disorder prediction 435 488 - -
Dod02g2959 817 Gene3D - 505 677 IPR027417 -
Dod02g2959 817 Coils Coil 730 750 - -
Dod02g2959 817 MobiDBLite consensus disorder prediction 202 224 - -
Dod02g2959 817 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 372 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2959 Dod-Chr2 62690410 62698517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2959 470 737 Calmodulin-binding Proteins AT3G56690 39.350 4.67e-45 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2959 - - gmx:100817952 1353.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0852 06 10597164 10599729 Dod02g2959 02 62690410 62698517 PCT