Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod02g2940 | ATGGAGGATTTTTGGAACGTGATTTGTCGGGATTCTGGTTGTTCTGAGACGGGGGAAAAGCGTTCCTGTTATGATTTCGAGTTTGTGAAAGACCCTTCCAAATGCATCAACCGTTTGTTGATAATTTGCTTTGATGTGTTACTGCTGATCATGCTGTCATTCATTCTGATCAAGAAGAAGTCTTCATCAACTCCACTTTGTGGCCTAGTGCGGCTTGGAAGATATTCATACTTGCAACTAGTTTCTGTCATAACCAATGGTTTCCTTGGTTTGGTGCATTTATGCTTTGGCATTTGGATTTTTGAGGAGATGTTAAGGAAAACCAACACTGCATTGCCTCTAAATTGGTGGTTACTGGAATTGTTTCAGGGACTCACATGGATTTTAGTAGGTTTAACAATAAGTCTTCGGCATAAACAACATCCAACAACATCGTTGCGGCTGTGTTCTGTTCTTCTTCTTTTAGGTTCTGGTATATTCTGTGCTTTGTCCTTGTTCTATGCAATTAGCAGCGGAGAGTTGTCCCTGAAGATAGCTTTAGATGTTGTTTCTTTTCCAGCAGCATTCTTGGTGCTCTTATGCACATTCAAAGTATGTGAGTGTCAAAACACTTGCAGAGAATATGATGAAAATCTTTACACCCCTTTAAATGGACAGTTCACTGAAACTGATTCTACTAGTGGTGTAACCACCCCATTTGCCAAAGCTGGATTCTTCAGTAGGATCTCATTTTGGTGGTTGAATCCATTGATGAAAAGGGGTAAAGAGAAAACACTTGAGGATGAGGATATCCCAAAGTTGCGCGAGTCGGATCGAGCAGAAAGTTGTTATTTGTTGTTTGTAGAAAAAATGAACGAACAAAAACAAAAACAAAAAGAACGTTCTTCACAGCCATCACTGTTGTGGACAATAGTTTTGTGCCACTGGAGAGAGATTTTGATGTCAGGATTCTTTGCCGTGCTCAAGGTACTCACTTTGTCATCTGGTCCTATATTACTGAATGCCTTTATATTGGTTGCTGAGGGTAATGAAAGTTTCAAATATGAAGGTTATGTATTGGCCATATCACTTTTCTTTATAAAGGTCACTGAATCCTTATCACAAAGGCAATGGTATTTTCGCAGTAGACTTATTGGCATGAAAGTTAGATCACTGCTTACTGCTTCCATTTATAAGAAACAATTGAAGCTGTCCAATGCTGCTAGATTGATGCATTCTGGTGGTGAGATAATGAATTATGTGGAGGTGGATGCTTATAGAATTGGAGAATTTCCATTTTGGTTTCACCAGACATGGACAACAAGCCTCCAAATATGTATTGCATTAGTAATTCTTGTCCGTGCCATTGGGCTGGCAACAATTGCCTCAATGGTGGTGATAGTTCTCACTGTATTTTGTAACGCTCCATTGGCAAAGTTACAGCATGAGTTCCAAAGCAAACTTATGGTGGCACAAGATGAGAGATTGAAGGCTAGTTCTGAGGCCCTTGTGAATATGAAAGTGTTGAAGTTATATGCATGGGAGACCCATTTTAGAAATGCTATAGAAAGATTAAGGAATGTGGAACTCAAAGCGTTAGCAGCAGTGCAATCAAGAAAGGCCTACGGCGTCTTTCTGTTTTGGACCTCACCTGTTTTGGTGTCCACGGCCTCTTTCGCCATGTGTTACTTCCTGAATATTCCTTTACATGCGAATAATGTTTTCACTTTTGTGGCAACATTGCGGCTCGTGCAAGAGCCAATTACAACCATCCCTGATGTCATTGGGGTGGTCATTCAAGCAAAAGTTGCATATGCCAGGATTGTAAAATTCCTTGACGCATCTGAATTGCAGAGTGCGAATTGCAGGAAGAGTTGTTTTAATGACAATCTCAGAGGCTCAATTTCAATCAAGTCTGCTGATTTTTCATGGGAAGATAATGTGTCGAAGCCAACCCTGAGAAACATAAATTTGGAGGTTAGAAAAGGGCAGAAGGTAGCTATTTGTGGTGAAGTTGGGTCAGGCAAATCAACCCTGTTGGCAACAATTCTTGGAGAAGTTCCTAATACAAAGGGAACTATTGAAGTTTTTGGGAGTTTTGCATATGTTTCTCAAACAGCATGGATACAGACGGGCACAATACGGGAAAATATTTTGTTTGGATCAGATTTGGATGCTCGAAGATATCAAGAGACACTTCACAGATCTTCACTACTTAAGGACCTCGAGTTGTTTCCCCATGGTGATCACACTGAAATAGGAGAGAGAGGAGTTAACCTGAGTGGGGGTCAAAAGCAGCGAGTTCAACTAGCCCGTGCCCTCTATCAGAATGCTGATATATATCTCTTGGATGATCCATTCAGTGCTGTTGATGCACATACAGCCACAAATTTGTTTAATGAATACATCATGGAAGGACTTGCAGGGAAGACTGTCTTACTTGTGACTCATCAAGTTGACTTCCTTCCAGCTTTTGATTCTGTTTTGTTGATGTCAGATGGAGAAATCCTACATGCTGCCCCCTATCAACATCTATTGGCATCAAGCCAGGAATTCCAGGAACTTGTCAATGCTCACAAGGAGACTGCTGGTTCTAACCATCTTGTGGATGCTCCTTCTGCCAGAAGACAGGCAACTTCTGCTATAGAAATTAGGCAATCTTTCTCGGAGAAGCAATCCAAAGCACCAAATGAAAATCAATTAATTAAGCAAGAAGAAAGAGAGATAGGAGACACAGGGTTGAAGCCTTATTTACAGTATCTGAATCAGAGGAGGGGTTATATATACTTCTCTGTTGCTTCACTTTGTCACCTTTCATTTGTGATTTGCCAGATACTGCAAAACTCATGGATGGCTGCTAACGTTGACAATCCCAATGTTGACACATTGCGATTGATTATAGTCTACTTGTTGATTGGAGTTGTTTCAATAGTTTTCTTGCTCATAAGAACTTTTCTTATAGTTGCTTTGGGTCTTCAATCATCAAAATATCTATTTTCAAAGTTAATGAACTCCCTTTTCCGCGCACCAATGTCTTTTTATGACTCCACACCTTTGGGGAGGATACTTAGTAGGGTCTCCTCAGATCTGAGCATTGTGGATCTTGATGTGCCATTTTACTTTGCTTTTACTATGGGAGGTACTATCAATTGTTATTCTACTCTTACAGTTTTAGCAGTTGTGACTTGGCAAGTCTTAGCTGTCTCCATACCAATGGTTCTTCTTGCAATTCGCTTGCAGAGATACTACTTTGCCACTGCAAAAGAATTGATGCGGATGAATGGCACAACAAAATCCTTTCTAGCTAATCATGTATCTGAAACTGCTGCTGGAGCTGTGACAATAAGGGCTTTTGCAGAGGAAGAACGCTTTTTTGAGAAGAATCTTGATCTAATTGATGTCAATGCTAGTCCTTTCTTCCATAATTTTTCTGCAAATGAGTGGTTGATCCAACGGTTAGAAACAGTTAGTGCAGTTGTTCTAGCCTTTGCAGCACTTTGCATGGTTGTGCTTCCACCTAATACATTCACCTCTGGATTTATTGGCATGGCTCTCTCTTATGGTCTTTCACTAAACGCTTCCTTAGTATTTTCAATTCAATTCCAATGCACTCTGGCAAATTATATAGTGTCCGTAGAGAGGCTAAATCAATATATGCATGTACCAAGTGAGGCCCCAGAAGTTATAGAAGGAAGTCGCCCTGCTGCTAATTGGCCAGTTGCAGGCAAAGTAGAAATAAGTGAATTGCAGATAAAATACAGGCCTAATGGACCACTTGTACTGCATGGAATCACATGCACATTTGAAGGAGGGCACAAGATTGGCATTGTTGGCAGGACAGGAAGTGGGAAGTCCACTCTCATAGCTGCATTGTTTCGTCTTGTGGAGCCAGCAGGAGGAAGAATTGTAGTCGATGGCATAGACATCTCATCCATTGGCCTTCATGATTTGAGGTCACGTTTGGGTGTTATACCTCAGGATCCTACTCTTTTTAATGGAACAGTCAGATATAACTTGGACCCTTTGTCTCAACACTCTGATCAAGAGATATGGGAGGTTCTTGGGAAGTGTCAGTTGCGAGAAGCTGTTCAAGAAAAGGAAGAGGGCTTGAGCTCCTCAGTTGTTGATGATGGATCAAACTGGAGCATGGGACAAAGGCAGTTATTCTGTTTGGGGCGTGCCCTTTTGAGGAGAAGTAGGATATTGGTGCTGGATGAAGCAACTGCATCAATTGACAATGCAACAGATTTGATTTTGCAGAAAACCATTAGGACCGAGTTTGCAGATTGCACAGTGATCACAGTTGCACACAGGATACCAACCGTGATGGATTGCACTATGGTTCTTTCCATCAGTGATGGAAAATTGGTGGAATATGATGAGCCAATGAACTTGATGAAGAGGGAGGGATCACTGTTTGGGAAGCTTGTTAAGGAATACTGGTCTCATCTTCAGTCTGCAGAATCACATTGA | 4452 | 0.4113 | MEDFWNVICRDSGCSETGEKRSCYDFEFVKDPSKCINRLLIICFDVLLLIMLSFILIKKKSSSTPLCGLVRLGRYSYLQLVSVITNGFLGLVHLCFGIWIFEEMLRKTNTALPLNWWLLELFQGLTWILVGLTISLRHKQHPTTSLRLCSVLLLLGSGIFCALSLFYAISSGELSLKIALDVVSFPAAFLVLLCTFKVCECQNTCREYDENLYTPLNGQFTETDSTSGVTTPFAKAGFFSRISFWWLNPLMKRGKEKTLEDEDIPKLRESDRAESCYLLFVEKMNEQKQKQKERSSQPSLLWTIVLCHWREILMSGFFAVLKVLTLSSGPILLNAFILVAEGNESFKYEGYVLAISLFFIKVTESLSQRQWYFRSRLIGMKVRSLLTASIYKKQLKLSNAARLMHSGGEIMNYVEVDAYRIGEFPFWFHQTWTTSLQICIALVILVRAIGLATIASMVVIVLTVFCNAPLAKLQHEFQSKLMVAQDERLKASSEALVNMKVLKLYAWETHFRNAIERLRNVELKALAAVQSRKAYGVFLFWTSPVLVSTASFAMCYFLNIPLHANNVFTFVATLRLVQEPITTIPDVIGVVIQAKVAYARIVKFLDASELQSANCRKSCFNDNLRGSISIKSADFSWEDNVSKPTLRNINLEVRKGQKVAICGEVGSGKSTLLATILGEVPNTKGTIEVFGSFAYVSQTAWIQTGTIRENILFGSDLDARRYQETLHRSSLLKDLELFPHGDHTEIGERGVNLSGGQKQRVQLARALYQNADIYLLDDPFSAVDAHTATNLFNEYIMEGLAGKTVLLVTHQVDFLPAFDSVLLMSDGEILHAAPYQHLLASSQEFQELVNAHKETAGSNHLVDAPSARRQATSAIEIRQSFSEKQSKAPNENQLIKQEEREIGDTGLKPYLQYLNQRRGYIYFSVASLCHLSFVICQILQNSWMAANVDNPNVDTLRLIIVYLLIGVVSIVFLLIRTFLIVALGLQSSKYLFSKLMNSLFRAPMSFYDSTPLGRILSRVSSDLSIVDLDVPFYFAFTMGGTINCYSTLTVLAVVTWQVLAVSIPMVLLAIRLQRYYFATAKELMRMNGTTKSFLANHVSETAAGAVTIRAFAEEERFFEKNLDLIDVNASPFFHNFSANEWLIQRLETVSAVVLAFAALCMVVLPPNTFTSGFIGMALSYGLSLNASLVFSIQFQCTLANYIVSVERLNQYMHVPSEAPEVIEGSRPAANWPVAGKVEISELQIKYRPNGPLVLHGITCTFEGGHKIGIVGRTGSGKSTLIAALFRLVEPAGGRIVVDGIDISSIGLHDLRSRLGVIPQDPTLFNGTVRYNLDPLSQHSDQEIWEVLGKCQLREAVQEKEEGLSSSVVDDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTMVLSISDGKLVEYDEPMNLMKREGSLFGKLVKEYWSHLQSAESH* | 1484 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod02g2940 | 1483 | CDD | ABC_6TM_ABCC_D1 | 315 | 601 | IPR044746 | GO:0140359 | |
Dod02g2940 | 1483 | Gene3D | ABC transporter type 1, transmembrane domain | 280 | 609 | IPR036640 | GO:0005524|GO:0016021 | |
Dod02g2940 | 1483 | Gene3D | ABC transporter type 1, transmembrane domain | 885 | 1218 | IPR036640 | GO:0005524|GO:0016021 | |
Dod02g2940 | 1483 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 313 | 593 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Dod02g2940 | 1483 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 71 | 1483 | - | - | |
Dod02g2940 | 1483 | Gene3D | - | 623 | 857 | IPR027417 | - | |
Dod02g2940 | 1483 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 958 | 1200 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Dod02g2940 | 1483 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 622 | 851 | IPR027417 | - | |
Dod02g2940 | 1483 | CDD | ABCC_MRP_domain1 | 628 | 828 | - | - | |
Dod02g2940 | 1483 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1228 | 1464 | IPR027417 | - | |
Dod02g2940 | 1483 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 630 | 851 | IPR003439 | GO:0005524 | |
Dod02g2940 | 1483 | SMART | AAA_5 | 1263 | 1455 | IPR003593 | - | |
Dod02g2940 | 1483 | SMART | AAA_5 | 655 | 828 | IPR003593 | - | |
Dod02g2940 | 1483 | SUPERFAMILY | ABC transporter transmembrane region | 910 | 1219 | IPR036640 | GO:0005524|GO:0016021 | |
Dod02g2940 | 1483 | Pfam | ABC transporter | 646 | 780 | IPR003439 | GO:0005524 | |
Dod02g2940 | 1483 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1237 | 1471 | IPR003439 | GO:0005524 | |
Dod02g2940 | 1483 | CDD | ABCC_MRP_domain2 | 1235 | 1455 | - | - | |
Dod02g2940 | 1483 | Pfam | ABC transporter transmembrane region | 313 | 574 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Dod02g2940 | 1483 | Pfam | ABC transporter transmembrane region | 931 | 1162 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Dod02g2940 | 1483 | ProSitePatterns | ABC transporters family signature. | 753 | 767 | IPR017871 | GO:0005524 | |
Dod02g2940 | 1483 | PANTHER | ABC TRANSPORTER C FAMILY PROTEIN | 71 | 1483 | - | - | |
Dod02g2940 | 1483 | CDD | ABC_6TM_ABCC_D2 | 923 | 1212 | IPR044726 | GO:0140359 | |
Dod02g2940 | 1483 | Gene3D | - | 1221 | 1472 | IPR027417 | - | |
Dod02g2940 | 1483 | Pfam | ABC transporter | 1254 | 1402 | IPR003439 | GO:0005524 | |
Dod02g2940 | 1483 | SUPERFAMILY | ABC transporter transmembrane region | 301 | 601 | IPR036640 | GO:0005524|GO:0016021 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod02g2940 | Dod-Chr2 | 62179770 | 62186216 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod02g2940 | 550 | 839 | Calmodulin-binding Proteins | AT2G36910 | 27.760 | 5.03e-27 | 118 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod02g2940 | K05666 | - | gmx:100811468 | 2319.27 |