Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2940 ATGGAGGATTTTTGGAACGTGATTTGTCGGGATTCTGGTTGTTCTGAGACGGGGGAAAAGCGTTCCTGTTATGATTTCGAGTTTGTGAAAGACCCTTCCAAATGCATCAACCGTTTGTTGATAATTTGCTTTGATGTGTTACTGCTGATCATGCTGTCATTCATTCTGATCAAGAAGAAGTCTTCATCAACTCCACTTTGTGGCCTAGTGCGGCTTGGAAGATATTCATACTTGCAACTAGTTTCTGTCATAACCAATGGTTTCCTTGGTTTGGTGCATTTATGCTTTGGCATTTGGATTTTTGAGGAGATGTTAAGGAAAACCAACACTGCATTGCCTCTAAATTGGTGGTTACTGGAATTGTTTCAGGGACTCACATGGATTTTAGTAGGTTTAACAATAAGTCTTCGGCATAAACAACATCCAACAACATCGTTGCGGCTGTGTTCTGTTCTTCTTCTTTTAGGTTCTGGTATATTCTGTGCTTTGTCCTTGTTCTATGCAATTAGCAGCGGAGAGTTGTCCCTGAAGATAGCTTTAGATGTTGTTTCTTTTCCAGCAGCATTCTTGGTGCTCTTATGCACATTCAAAGTATGTGAGTGTCAAAACACTTGCAGAGAATATGATGAAAATCTTTACACCCCTTTAAATGGACAGTTCACTGAAACTGATTCTACTAGTGGTGTAACCACCCCATTTGCCAAAGCTGGATTCTTCAGTAGGATCTCATTTTGGTGGTTGAATCCATTGATGAAAAGGGGTAAAGAGAAAACACTTGAGGATGAGGATATCCCAAAGTTGCGCGAGTCGGATCGAGCAGAAAGTTGTTATTTGTTGTTTGTAGAAAAAATGAACGAACAAAAACAAAAACAAAAAGAACGTTCTTCACAGCCATCACTGTTGTGGACAATAGTTTTGTGCCACTGGAGAGAGATTTTGATGTCAGGATTCTTTGCCGTGCTCAAGGTACTCACTTTGTCATCTGGTCCTATATTACTGAATGCCTTTATATTGGTTGCTGAGGGTAATGAAAGTTTCAAATATGAAGGTTATGTATTGGCCATATCACTTTTCTTTATAAAGGTCACTGAATCCTTATCACAAAGGCAATGGTATTTTCGCAGTAGACTTATTGGCATGAAAGTTAGATCACTGCTTACTGCTTCCATTTATAAGAAACAATTGAAGCTGTCCAATGCTGCTAGATTGATGCATTCTGGTGGTGAGATAATGAATTATGTGGAGGTGGATGCTTATAGAATTGGAGAATTTCCATTTTGGTTTCACCAGACATGGACAACAAGCCTCCAAATATGTATTGCATTAGTAATTCTTGTCCGTGCCATTGGGCTGGCAACAATTGCCTCAATGGTGGTGATAGTTCTCACTGTATTTTGTAACGCTCCATTGGCAAAGTTACAGCATGAGTTCCAAAGCAAACTTATGGTGGCACAAGATGAGAGATTGAAGGCTAGTTCTGAGGCCCTTGTGAATATGAAAGTGTTGAAGTTATATGCATGGGAGACCCATTTTAGAAATGCTATAGAAAGATTAAGGAATGTGGAACTCAAAGCGTTAGCAGCAGTGCAATCAAGAAAGGCCTACGGCGTCTTTCTGTTTTGGACCTCACCTGTTTTGGTGTCCACGGCCTCTTTCGCCATGTGTTACTTCCTGAATATTCCTTTACATGCGAATAATGTTTTCACTTTTGTGGCAACATTGCGGCTCGTGCAAGAGCCAATTACAACCATCCCTGATGTCATTGGGGTGGTCATTCAAGCAAAAGTTGCATATGCCAGGATTGTAAAATTCCTTGACGCATCTGAATTGCAGAGTGCGAATTGCAGGAAGAGTTGTTTTAATGACAATCTCAGAGGCTCAATTTCAATCAAGTCTGCTGATTTTTCATGGGAAGATAATGTGTCGAAGCCAACCCTGAGAAACATAAATTTGGAGGTTAGAAAAGGGCAGAAGGTAGCTATTTGTGGTGAAGTTGGGTCAGGCAAATCAACCCTGTTGGCAACAATTCTTGGAGAAGTTCCTAATACAAAGGGAACTATTGAAGTTTTTGGGAGTTTTGCATATGTTTCTCAAACAGCATGGATACAGACGGGCACAATACGGGAAAATATTTTGTTTGGATCAGATTTGGATGCTCGAAGATATCAAGAGACACTTCACAGATCTTCACTACTTAAGGACCTCGAGTTGTTTCCCCATGGTGATCACACTGAAATAGGAGAGAGAGGAGTTAACCTGAGTGGGGGTCAAAAGCAGCGAGTTCAACTAGCCCGTGCCCTCTATCAGAATGCTGATATATATCTCTTGGATGATCCATTCAGTGCTGTTGATGCACATACAGCCACAAATTTGTTTAATGAATACATCATGGAAGGACTTGCAGGGAAGACTGTCTTACTTGTGACTCATCAAGTTGACTTCCTTCCAGCTTTTGATTCTGTTTTGTTGATGTCAGATGGAGAAATCCTACATGCTGCCCCCTATCAACATCTATTGGCATCAAGCCAGGAATTCCAGGAACTTGTCAATGCTCACAAGGAGACTGCTGGTTCTAACCATCTTGTGGATGCTCCTTCTGCCAGAAGACAGGCAACTTCTGCTATAGAAATTAGGCAATCTTTCTCGGAGAAGCAATCCAAAGCACCAAATGAAAATCAATTAATTAAGCAAGAAGAAAGAGAGATAGGAGACACAGGGTTGAAGCCTTATTTACAGTATCTGAATCAGAGGAGGGGTTATATATACTTCTCTGTTGCTTCACTTTGTCACCTTTCATTTGTGATTTGCCAGATACTGCAAAACTCATGGATGGCTGCTAACGTTGACAATCCCAATGTTGACACATTGCGATTGATTATAGTCTACTTGTTGATTGGAGTTGTTTCAATAGTTTTCTTGCTCATAAGAACTTTTCTTATAGTTGCTTTGGGTCTTCAATCATCAAAATATCTATTTTCAAAGTTAATGAACTCCCTTTTCCGCGCACCAATGTCTTTTTATGACTCCACACCTTTGGGGAGGATACTTAGTAGGGTCTCCTCAGATCTGAGCATTGTGGATCTTGATGTGCCATTTTACTTTGCTTTTACTATGGGAGGTACTATCAATTGTTATTCTACTCTTACAGTTTTAGCAGTTGTGACTTGGCAAGTCTTAGCTGTCTCCATACCAATGGTTCTTCTTGCAATTCGCTTGCAGAGATACTACTTTGCCACTGCAAAAGAATTGATGCGGATGAATGGCACAACAAAATCCTTTCTAGCTAATCATGTATCTGAAACTGCTGCTGGAGCTGTGACAATAAGGGCTTTTGCAGAGGAAGAACGCTTTTTTGAGAAGAATCTTGATCTAATTGATGTCAATGCTAGTCCTTTCTTCCATAATTTTTCTGCAAATGAGTGGTTGATCCAACGGTTAGAAACAGTTAGTGCAGTTGTTCTAGCCTTTGCAGCACTTTGCATGGTTGTGCTTCCACCTAATACATTCACCTCTGGATTTATTGGCATGGCTCTCTCTTATGGTCTTTCACTAAACGCTTCCTTAGTATTTTCAATTCAATTCCAATGCACTCTGGCAAATTATATAGTGTCCGTAGAGAGGCTAAATCAATATATGCATGTACCAAGTGAGGCCCCAGAAGTTATAGAAGGAAGTCGCCCTGCTGCTAATTGGCCAGTTGCAGGCAAAGTAGAAATAAGTGAATTGCAGATAAAATACAGGCCTAATGGACCACTTGTACTGCATGGAATCACATGCACATTTGAAGGAGGGCACAAGATTGGCATTGTTGGCAGGACAGGAAGTGGGAAGTCCACTCTCATAGCTGCATTGTTTCGTCTTGTGGAGCCAGCAGGAGGAAGAATTGTAGTCGATGGCATAGACATCTCATCCATTGGCCTTCATGATTTGAGGTCACGTTTGGGTGTTATACCTCAGGATCCTACTCTTTTTAATGGAACAGTCAGATATAACTTGGACCCTTTGTCTCAACACTCTGATCAAGAGATATGGGAGGTTCTTGGGAAGTGTCAGTTGCGAGAAGCTGTTCAAGAAAAGGAAGAGGGCTTGAGCTCCTCAGTTGTTGATGATGGATCAAACTGGAGCATGGGACAAAGGCAGTTATTCTGTTTGGGGCGTGCCCTTTTGAGGAGAAGTAGGATATTGGTGCTGGATGAAGCAACTGCATCAATTGACAATGCAACAGATTTGATTTTGCAGAAAACCATTAGGACCGAGTTTGCAGATTGCACAGTGATCACAGTTGCACACAGGATACCAACCGTGATGGATTGCACTATGGTTCTTTCCATCAGTGATGGAAAATTGGTGGAATATGATGAGCCAATGAACTTGATGAAGAGGGAGGGATCACTGTTTGGGAAGCTTGTTAAGGAATACTGGTCTCATCTTCAGTCTGCAGAATCACATTGA 4452 0.4113 MEDFWNVICRDSGCSETGEKRSCYDFEFVKDPSKCINRLLIICFDVLLLIMLSFILIKKKSSSTPLCGLVRLGRYSYLQLVSVITNGFLGLVHLCFGIWIFEEMLRKTNTALPLNWWLLELFQGLTWILVGLTISLRHKQHPTTSLRLCSVLLLLGSGIFCALSLFYAISSGELSLKIALDVVSFPAAFLVLLCTFKVCECQNTCREYDENLYTPLNGQFTETDSTSGVTTPFAKAGFFSRISFWWLNPLMKRGKEKTLEDEDIPKLRESDRAESCYLLFVEKMNEQKQKQKERSSQPSLLWTIVLCHWREILMSGFFAVLKVLTLSSGPILLNAFILVAEGNESFKYEGYVLAISLFFIKVTESLSQRQWYFRSRLIGMKVRSLLTASIYKKQLKLSNAARLMHSGGEIMNYVEVDAYRIGEFPFWFHQTWTTSLQICIALVILVRAIGLATIASMVVIVLTVFCNAPLAKLQHEFQSKLMVAQDERLKASSEALVNMKVLKLYAWETHFRNAIERLRNVELKALAAVQSRKAYGVFLFWTSPVLVSTASFAMCYFLNIPLHANNVFTFVATLRLVQEPITTIPDVIGVVIQAKVAYARIVKFLDASELQSANCRKSCFNDNLRGSISIKSADFSWEDNVSKPTLRNINLEVRKGQKVAICGEVGSGKSTLLATILGEVPNTKGTIEVFGSFAYVSQTAWIQTGTIRENILFGSDLDARRYQETLHRSSLLKDLELFPHGDHTEIGERGVNLSGGQKQRVQLARALYQNADIYLLDDPFSAVDAHTATNLFNEYIMEGLAGKTVLLVTHQVDFLPAFDSVLLMSDGEILHAAPYQHLLASSQEFQELVNAHKETAGSNHLVDAPSARRQATSAIEIRQSFSEKQSKAPNENQLIKQEEREIGDTGLKPYLQYLNQRRGYIYFSVASLCHLSFVICQILQNSWMAANVDNPNVDTLRLIIVYLLIGVVSIVFLLIRTFLIVALGLQSSKYLFSKLMNSLFRAPMSFYDSTPLGRILSRVSSDLSIVDLDVPFYFAFTMGGTINCYSTLTVLAVVTWQVLAVSIPMVLLAIRLQRYYFATAKELMRMNGTTKSFLANHVSETAAGAVTIRAFAEEERFFEKNLDLIDVNASPFFHNFSANEWLIQRLETVSAVVLAFAALCMVVLPPNTFTSGFIGMALSYGLSLNASLVFSIQFQCTLANYIVSVERLNQYMHVPSEAPEVIEGSRPAANWPVAGKVEISELQIKYRPNGPLVLHGITCTFEGGHKIGIVGRTGSGKSTLIAALFRLVEPAGGRIVVDGIDISSIGLHDLRSRLGVIPQDPTLFNGTVRYNLDPLSQHSDQEIWEVLGKCQLREAVQEKEEGLSSSVVDDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTMVLSISDGKLVEYDEPMNLMKREGSLFGKLVKEYWSHLQSAESH* 1484
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2940 1483 CDD ABC_6TM_ABCC_D1 315 601 IPR044746 GO:0140359
Dod02g2940 1483 Gene3D ABC transporter type 1, transmembrane domain 280 609 IPR036640 GO:0005524|GO:0016021
Dod02g2940 1483 Gene3D ABC transporter type 1, transmembrane domain 885 1218 IPR036640 GO:0005524|GO:0016021
Dod02g2940 1483 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 313 593 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod02g2940 1483 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 71 1483 - -
Dod02g2940 1483 Gene3D - 623 857 IPR027417 -
Dod02g2940 1483 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 958 1200 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod02g2940 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 622 851 IPR027417 -
Dod02g2940 1483 CDD ABCC_MRP_domain1 628 828 - -
Dod02g2940 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1228 1464 IPR027417 -
Dod02g2940 1483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 630 851 IPR003439 GO:0005524
Dod02g2940 1483 SMART AAA_5 1263 1455 IPR003593 -
Dod02g2940 1483 SMART AAA_5 655 828 IPR003593 -
Dod02g2940 1483 SUPERFAMILY ABC transporter transmembrane region 910 1219 IPR036640 GO:0005524|GO:0016021
Dod02g2940 1483 Pfam ABC transporter 646 780 IPR003439 GO:0005524
Dod02g2940 1483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1237 1471 IPR003439 GO:0005524
Dod02g2940 1483 CDD ABCC_MRP_domain2 1235 1455 - -
Dod02g2940 1483 Pfam ABC transporter transmembrane region 313 574 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod02g2940 1483 Pfam ABC transporter transmembrane region 931 1162 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod02g2940 1483 ProSitePatterns ABC transporters family signature. 753 767 IPR017871 GO:0005524
Dod02g2940 1483 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 71 1483 - -
Dod02g2940 1483 CDD ABC_6TM_ABCC_D2 923 1212 IPR044726 GO:0140359
Dod02g2940 1483 Gene3D - 1221 1472 IPR027417 -
Dod02g2940 1483 Pfam ABC transporter 1254 1402 IPR003439 GO:0005524
Dod02g2940 1483 SUPERFAMILY ABC transporter transmembrane region 301 601 IPR036640 GO:0005524|GO:0016021
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dod02g2940 Dod-Chr2 62179770 62186216 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2940 550 839 Calmodulin-binding Proteins AT2G36910 27.760 5.03e-27 118
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2940 K05666 - gmx:100811468 2319.27