Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2930 ATGGATTTTGTTGAAGGTGTCGGAGAGAGCTCGTCGCCACCGCGGACGTTCGGCGGTTTCAGCAACTACGACGTGAGGACCGATGTATACAATCGGTTGGTGGAAACCGGCCACGATCAGGCCGTGTCGAATCCCGATTTTCGAGAGCTGCTCGAAGCTCACTTCAATCGCTTGCCTCCAAGTTATGGACTTGATGTTAATATGGATAGAGCTGAAGATGTTCTATTGCATCAGAGTCTTCTTAGTTTGGCAAGAGACCCAGAAAAGCGCCCTGTCTTCCATGTCCGCTTCTTGGAGAATATTTCAACACGAACAGATGGTGAAGAGCAAGAAATAGCAAGTACACATTCTAGTCCTGGGCCATCTTCTCATGGAACTAATGGGGGAGCTGTATCATCTCATAAGAGGACAAGGGATCGTGCAACTGACTTTGAGCCTTGCTCGAAGCTTGAAAACCTAAATTTGGATGTAAGAAAGAATTCGAAGGATATAGAGGAAAGATTTCTTGCTGACAACTTTTCCCCGAGGCAGGAGCATTCAAGTGTCCCAATTCATGAAGTAATATTTTCCACTCTTGACAAGCCAAAGCTTTTAAGCCAGCTGTCAGCTTTGCTGTCTGATATTGGGCTGAACATCAGGGAAGCACATGTTTTTTCCACCACTGATGGCTACTCCCTCGACGTATTTGTGGTTGATGGATGGCCAGTAGAGGAAACAGATGGTTTGTATGATGCTATGGAAAAAGCTGTGGCGAGAAGTGAGGGATCATGGTCTCACTCTTCAAATTCCAGTTCAACTTTGGAGAAACCCTTAGCTGCAGCAGCAACATCTGGAGATTGGGAAATAGACAGGAGGTTGTTGAAGATAGGAGAAAGAATAGCATCTGGATCCTGTGGAGATTTGTATCATGGAGTTTATCTAGGTCAAGATGTTGCTGTTAAAGTCATGAGATCTGAGCAACTGAATGATGCTTTAGAGGATGAATTTGCTCAAGAAGTTGCAATTCTGAAGCAGGTGCATCATAAAAATGTTGTTGGTTTCATTGGTGCATGTACAAAGTCTCCACATTTGTGTATAGTAACTGAGTATATGCCTGGAGGAAGTCTGTATGACTACTTGCACAAAAACCATAATGTTTTGGAGCTGTCTCCATTGCTGAAGTTTGCAATTGATGTTTGCAAGGGTATGGAGTATTTGCATAGAAACAACATAATTCACAGGGATCTGAAGACGGCCAATCTGCTGATGGATACAAATAATGTTGTTAAAGTAGCAGATTTTGGAGTTGCTCGGTTCCTAAATCAGAAGGGAGTGATGACAGCAGAAACTGGAACATATAGATGGATGGCACCAGAGGTTATAAACCATCAGCCATATGATCAGAAAGCCGACGTGTTTAGTTTTTCCATAGTACTGTGGGAACTAGTGACAGCAAAGGTACCTTATGATACCATGACTCCACTACAAGCTGCCTTGGGTGTGAGACAGGGACTGCGCCCAGAACTTCCGAAGCATGGGCACCCTAAACTATTAGATTTGATGCAAAGATGTTGGGAAGCAGATCCAAGCAACCGGCCTAGTTTCCATGAGATAACTGTTGAACTTGACAATCTTTTACATGAAGTTGAGAATGATTCACAAGCTAATGGCACTTGA 1656 0.4372 MDFVEGVGESSSPPRTFGGFSNYDVRTDVYNRLVETGHDQAVSNPDFRELLEAHFNRLPPSYGLDVNMDRAEDVLLHQSLLSLARDPEKRPVFHVRFLENISTRTDGEEQEIASTHSSPGPSSHGTNGGAVSSHKRTRDRATDFEPCSKLENLNLDVRKNSKDIEERFLADNFSPRQEHSSVPIHEVIFSTLDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPVEETDGLYDAMEKAVARSEGSWSHSSNSSSTLEKPLAAAATSGDWEIDRRLLKIGERIASGSCGDLYHGVYLGQDVAVKVMRSEQLNDALEDEFAQEVAILKQVHHKNVVGFIGACTKSPHLCIVTEYMPGGSLYDYLHKNHNVLELSPLLKFAIDVCKGMEYLHRNNIIHRDLKTANLLMDTNNVVKVADFGVARFLNQKGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKVPYDTMTPLQAALGVRQGLRPELPKHGHPKLLDLMQRCWEADPSNRPSFHEITVELDNLLHEVENDSQANGT* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2930 551 SMART serkin_6 287 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2930 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Dod02g2930 551 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 545 - -
Dod02g2930 551 MobiDBLite consensus disorder prediction 104 145 - -
Dod02g2930 551 Gene3D Transferase(Phosphotransferase) domain 1 365 550 - -
Dod02g2930 551 Pfam Protein tyrosine and serine/threonine kinase 287 534 IPR001245 GO:0004672|GO:0006468
Dod02g2930 551 SUPERFAMILY Protein kinase-like (PK-like) 262 538 IPR011009 -
Dod02g2930 551 MobiDBLite consensus disorder prediction 112 132 - -
Dod02g2930 551 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 10 545 - -
Dod02g2930 551 ProSiteProfiles ACT domain profile. 186 264 IPR002912 -
Dod02g2930 551 CDD STKc_MAP3K-like 293 535 - -
Dod02g2930 551 Gene3D Phosphorylase Kinase; domain 1 275 364 - -
Dod02g2930 551 PRINTS Tyrosine kinase catalytic domain signature 398 416 IPR001245 GO:0004672|GO:0006468
Dod02g2930 551 PRINTS Tyrosine kinase catalytic domain signature 444 454 IPR001245 GO:0004672|GO:0006468
Dod02g2930 551 PRINTS Tyrosine kinase catalytic domain signature 506 528 IPR001245 GO:0004672|GO:0006468
Dod02g2930 551 PRINTS Tyrosine kinase catalytic domain signature 361 374 IPR001245 GO:0004672|GO:0006468
Dod02g2930 551 PRINTS Tyrosine kinase catalytic domain signature 463 485 IPR001245 GO:0004672|GO:0006468
Dod02g2930 551 ProSiteProfiles Protein kinase domain profile. 287 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2930 551 SUPERFAMILY ACT-like 185 253 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2930 Dod-Chr2 61796815 61819102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2930 24 547 MAP Kinase Kinase Kinase AT4G35780 50.000 0.0 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dod02g2930 PK_Tyr_Ser-Thr 8.6e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2930 - - gmx:100782737 935.25