Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2918 ATGCTGGGGGACTCACCTGTGTTGGGGACAGGAGGAGGTAGCTCTGGTGACGCAGTAGCGGTTGCTGTGCCAACGACAGCAGCAGCTGCTATTGCATCACCAGACGCGGCCACAGTTGGCAGTGACGGTGGTGTCGGCGGTGGTGGCGTGGGCGGAGGATCAAACTCAGGAGATGATGAGAAGGGTAGAGGAGAGGAAGGTGAGAGGAGCTTTGGTGGGAACAGGTGGCCAAGACAAGAGACTCTGGCTTTGTTGAAGATACGGTCAGATATGGGCGTGGCTTTTCGTGATGCTAGTGTTAAGGGTCCCTTGTGGGAAGAGGTCTCAAGGAAGCTGGCAGAGCTTGGGTACCACAGGAATGCCAAGAAATGCAAAGAGAAATTCGAGAACGTTTACAAGTACCACAAGAGAACCAAAGAAGGTAGAAGTGGCAAATCAGATGGCAAAACATACAGGTTCTTTGATCAATTAGAGGCCCTTGAGCACAACCCTGCAATTCAATCCCCAAGGCCACCACAACCAGCACAAACAGCACTACCTGCAACACCAGTATCAATAGTAAAAACAACTGCATCATTGCCACAAGCCCCAACAACCACAGCTACTACAACAGTGCCAATGCCACAAGTGAGTAGTACCAATAACACAATTCCTATTAGTACTAGTGTGCCCCCACATGCCACCACCAACACTACTATTCCATCAACAGCAACACTCCCAACAATGTCTATGCCTCAAAGCAATGTTCTCAACATCCCAACAATAAACCTCACAGCCCCTTCATCATACCCACAACAAACAAACCCTACATACAATTTCCCACCACCACCACCATCAACAGCAAACCCTACTAGTTCCCTCCCACCTTCTTTTCCCAGCATACCAGCCGAACTCTTGTCGAATTCAAGTTCTTCATCGACTTCATCGGAGGATACAATTGAAGGGAGGCGCAAGAGGAAGAGGAAATGGAAGGACTTCTTCGAGAGGCTAATGAAGGAGGTGGTAGAGAAGCAAGAGGAGCTGCAAAGGAGGTTCTTGGAGGCCATAGAGAAGAGAGAGCAAGAGAGAGTGGCAAGAGAAGAGGCATGGAGGGTGCAAGAGATGCAAAGGATCAATAGGGAGAAGGAGATCCTCGCACAAGAGAGGTCCATAGCTGCAGCAAAAGACCAGGCCGTGATGTCATTCTTGCAGAAGATAGCTGAACAACAAAACCTTGGGACAGCATTGACCAACATCAACATTCCCCAAACAACAACAACAGCGGCAACAACAACACCAACACCAGCACCAATAGTGCAGCAACAACAACAGCAAGCACAAGTTACAAGTACGGAACCAGCTGTGGTGGTGCCAATGGCCCCACAACAACAGCAGCAGCAAGTGATTAGGAACATGGAGATCGTGAAAGCTGATAATAATGGTGAGAATTTGATGGGAACGAGCTCTTCTAGGTGGCCAAAAGCTGAAGTTCAGGCACTGATTGATCTGAGAACAAGCCTTGACACAAAGTACCAAGAAAGTGGACCAAAGGGGCCACTATGGGAGGAAATTTCATCGCTGATGAGGAAGATTGGTTACAACAGGAGCGCAAAACGATGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAAGTGAAAGAGAGCAACAAGAAGAGGCCAGAAGATTCCAAGACTTGTCCATATTTCCACCAATTGGATGCTCTTTATAGGGAGAAGAACAAGCAAGAGGGTACCGTGAGGCCTAATGAAACCACGATGGCGCCCCTCATGGTGCAGCCGGAGCAGCAGTGGCCTCCTCAGCAGGCAGTGCAGCCGCCGCCAGAAGCCGAGGGGAGTGACCCCGCGGACGACCGGCAACAACAGCACCATCATGAGGAGGAGGAAGATGAGGAGAAAGATATGGGTGATGAGGATGAAGATGAGGATGATGATGATGACGATGATGATGATGATGATGAAGGTGGTGGTAACTATGAGATAGTGGCAAGCAAGCCAGCTTCAGTGGGTGCATCTGCTGAGTGA 2028 0.4951 MLGDSPVLGTGGGSSGDAVAVAVPTTAAAAIASPDAATVGSDGGVGGGGVGGGSNSGDDEKGRGEEGERSFGGNRWPRQETLALLKIRSDMGVAFRDASVKGPLWEEVSRKLAELGYHRNAKKCKEKFENVYKYHKRTKEGRSGKSDGKTYRFFDQLEALEHNPAIQSPRPPQPAQTALPATPVSIVKTTASLPQAPTTTATTTVPMPQVSSTNNTIPISTSVPPHATTNTTIPSTATLPTMSMPQSNVLNIPTINLTAPSSYPQQTNPTYNFPPPPPSTANPTSSLPPSFPSIPAELLSNSSSSSTSSEDTIEGRRKRKRKWKDFFERLMKEVVEKQEELQRRFLEAIEKREQERVAREEAWRVQEMQRINREKEILAQERSIAAAKDQAVMSFLQKIAEQQNLGTALTNINIPQTTTTAATTTPTPAPIVQQQQQQAQVTSTEPAVVVPMAPQQQQQQVIRNMEIVKADNNGENLMGTSSSRWPKAEVQALIDLRTSLDTKYQESGPKGPLWEEISSLMRKIGYNRSAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYREKNKQEGTVRPNETTMAPLMVQPEQQWPPQQAVQPPPEAEGSDPADDRQQQHHHEEEEDEEKDMGDEDEDEDDDDDDDDDDDEGGGNYEIVASKPASVGASAE* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2918 675 MobiDBLite consensus disorder prediction 269 290 - -
Dod02g2918 675 PANTHER - 29 666 - -
Dod02g2918 675 MobiDBLite consensus disorder prediction 58 73 - -
Dod02g2918 675 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 29 666 - -
Dod02g2918 675 MobiDBLite consensus disorder prediction 295 310 - -
Dod02g2918 675 MobiDBLite consensus disorder prediction 191 245 - -
Dod02g2918 675 Pfam Myb/SANT-like DNA-binding domain 483 570 IPR044822 -
Dod02g2918 675 Pfam Myb/SANT-like DNA-binding domain 74 160 IPR044822 -
Dod02g2918 675 MobiDBLite consensus disorder prediction 33 75 - -
Dod02g2918 675 SMART sant 481 543 IPR001005 -
Dod02g2918 675 SMART sant 72 134 IPR001005 -
Dod02g2918 675 MobiDBLite consensus disorder prediction 632 658 - -
Dod02g2918 675 ProSiteProfiles Myb-like domain profile. 74 132 IPR001005 -
Dod02g2918 675 MobiDBLite consensus disorder prediction 257 319 - -
Dod02g2918 675 CDD GT1 483 548 - -
Dod02g2918 675 CDD GT1 74 139 - -
Dod02g2918 675 Coils Coil 324 351 - -
Dod02g2918 675 Gene3D - 485 546 - -
Dod02g2918 675 Gene3D - 76 137 - -
Dod02g2918 675 MobiDBLite consensus disorder prediction 613 631 - -
Dod02g2918 675 MobiDBLite consensus disorder prediction 590 675 - -
Dod02g2918 675 ProSiteProfiles Myb-like domain profile. 483 541 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2918 Dod-Chr2 61615025 61618622 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2918 72 606 Trihelix Transcription Factor Family AT1G76890 46.824 5.96e-144 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod02g2918 Myb_DNA-bind_4 3.4e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2918 - - gmx:100804788 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2918 02 61615025 61618622 Dod06g0887 06 11238585 11242541 PCT