Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2917 ATGGCGGTGACGGCGGCGGCGGCACCGGCACCGCAGGAAGAAGCGGCGCGTGAAGGTGTCAACGGTGGTCATGAAGTAGTTGGGATGGAAGTGGATGCAAATTCATCAGGTGAAGAGAAAGGAAGAGAATTAGGAGAAGGAGGAGGAGGAGGTGATGATCATGAAGGTGATAAGATCAGCTTTGGAGGAAACCGGTGGCCCCGCCAAGAAACTTTGGCTCTCTTGAAGATAAGGTCAGATATGGATGCAGTGTTTCGGGATTCAAGTCTTAAAGGTCCACTTTGGGAAGAAGTTTCAAGGAAACTAGCAGAGCTTGGATATCACAGAAGTGCAAAGAAGTGCAAGGAGAAATTTGAGAACGTGTACAAGTACCACAAGAGAACCAAAGAGAGCAGAAGTGGGAAATCAGAAGGAAAAACATATAAATTCTTTGATCAATTACAAGCCCTTGAGAACCAATTCGTAGTCTCATACCAGCCAAAACCACAACCAGTTTTGGCAACAACAACAACAACAACTACAAACACAGTGGCATTCCCAATAACAAGGCCTAGTGATAGCACAACCATATCTCATGCCACAACCACTTTTCCATCCACAAACACTATCATCTCTTCTTCAGCACCACCAACCAATAATGCTACGACCACCACAGCCACAACTACAACCACAACAGTAACCAACACTAGAAACCCACCATCACAACCAAACAACATCAGTGTTGTCCCACATTCCTTGCCCAGCGACAACAACAACAGCAACATGAACCTAATCTTCTCACCATCACCAACCTCCACATCTTCCTCCACAGCATCAGATGAAGGCTTGGAAGAGAGGTACAGGAAGAAGAGGAAATGGAAGGACTACTTCAGGAGGCTCACCAGGCAGGTCCTGGCAAAGCAAGAGGAGATGCAGAAGTGGTTCCTTGAAGCCATAGACAAAAAGGAGAGAGAAAGGATGGCACAAGAAGATGCTTGGAGGATGCAAGAGCTTGCAAGGATCAACAAGGAACACGAGATCCTTGTCCAAGAAAGATCAAATGCTGCAGCCAAAGATGCAGCTGTTATTGCACTCTTGCACAAGTTGTCTGGCCAACAAAACCCCCCACAACCGGCTGCACCGCCACAGCTGCTGCCGCCACAAGTAGTGCCACCACAACAGCAGCAACAGAAAGCTCAGCAGGAGCTATCACAGCCACAGCCACAGCCACCACCACCATTGATGCCAAACAACAATTTTGAGATCCAGGGAATAATGAATAATGGTCATAGTGGTGTTGTAACTACTACTCCAATGAGCTCTTCTGCTACTTCTTCTTCAAGGTGGCCAAAGGCTGAAGTTCATGCTTTGATAAGGCTGAGGACAAGTCTTGAGGCCAAGTATCAGGAGAATGGACCTAAAGCTCCATTGTGGGAGGATATATCAGCTGGTATGGAGAGGCTTGGGTATAACCGAAATGCCAAGAGATGCAAAGAGAAGTGGGAGAATATCAACAAATACTTCAAGAAAGTGAAGGAGAGTAGCAAGCAAAGGCGCGAGGATAGCAAGACTTGTCCCTATTTCAACGAGCTTGATGCTATTTACAAGGAAAGGAGCAAGAACCAGAACCCCTTTGGAAATGTGAAGCCGAGTGAGATGATGATGGAGCCGTTGATGGTGCAACCGGAGCAGCAATGGAGGCCTCCACCTCAATATCATCATGAACAGCAGCCATTGCAAGATCAAGATGGTGTAGCTAATGAGAATGCCACAAGTCAAAGCCAAGAAAAGGAAGCACAAGCACAAGCAGAAGAAGCAGAACTAGAAGAAGAAGAAGATGATGAATATGTTGATGACGAAGATGGAGATACCAGTGTTGAAGATGAAAGTGCTAGCCGTTATGAGATTGTGACAAATAAACTTTCTTCAGTGGACACCGTTGAATGA 1926 0.4637 MAVTAAAAPAPQEEAAREGVNGGHEVVGMEVDANSSGEEKGRELGEGGGGGDDHEGDKISFGGNRWPRQETLALLKIRSDMDAVFRDSSLKGPLWEEVSRKLAELGYHRSAKKCKEKFENVYKYHKRTKESRSGKSEGKTYKFFDQLQALENQFVVSYQPKPQPVLATTTTTTTNTVAFPITRPSDSTTISHATTTFPSTNTIISSSAPPTNNATTTTATTTTTTVTNTRNPPSQPNNISVVPHSLPSDNNNSNMNLIFSPSPTSTSSSTASDEGLEERYRKKRKWKDYFRRLTRQVLAKQEEMQKWFLEAIDKKERERMAQEDAWRMQELARINKEHEILVQERSNAAAKDAAVIALLHKLSGQQNPPQPAAPPQLLPPQVVPPQQQQQKAQQELSQPQPQPPPPLMPNNNFEIQGIMNNGHSGVVTTTPMSSSATSSSRWPKAEVHALIRLRTSLEAKYQENGPKAPLWEDISAGMERLGYNRNAKRCKEKWENINKYFKKVKESSKQRREDSKTCPYFNELDAIYKERSKNQNPFGNVKPSEMMMEPLMVQPEQQWRPPPQYHHEQQPLQDQDGVANENATSQSQEKEAQAQAEEAELEEEEDDEYVDDEDGDTSVEDESASRYEIVTNKLSSVDTVE* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2917 641 CDD GT1 64 129 - -
Dod02g2917 641 Pfam Myb/SANT-like DNA-binding domain 440 527 IPR044822 -
Dod02g2917 641 Pfam Myb/SANT-like DNA-binding domain 64 150 IPR044822 -
Dod02g2917 641 ProSiteProfiles Myb-like domain profile. 64 122 IPR001005 -
Dod02g2917 641 MobiDBLite consensus disorder prediction 568 592 - -
Dod02g2917 641 MobiDBLite consensus disorder prediction 383 397 - -
Dod02g2917 641 MobiDBLite consensus disorder prediction 35 61 - -
Dod02g2917 641 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 25 629 - -
Dod02g2917 641 CDD GT1 441 505 - -
Dod02g2917 641 MobiDBLite consensus disorder prediction 413 441 - -
Dod02g2917 641 Coils Coil 580 607 - -
Dod02g2917 641 PANTHER - 25 629 - -
Dod02g2917 641 MobiDBLite consensus disorder prediction 596 619 - -
Dod02g2917 641 MobiDBLite consensus disorder prediction 201 238 - -
Dod02g2917 641 ProSiteProfiles Myb-like domain profile. 434 498 IPR001005 -
Dod02g2917 641 MobiDBLite consensus disorder prediction 558 641 - -
Dod02g2917 641 SMART sant 62 124 IPR001005 -
Dod02g2917 641 SMART sant 438 500 IPR001005 -
Dod02g2917 641 MobiDBLite consensus disorder prediction 260 279 - -
Dod02g2917 641 Gene3D - 66 127 - -
Dod02g2917 641 Gene3D - 442 503 - -
Dod02g2917 641 MobiDBLite consensus disorder prediction 1 64 - -
Dod02g2917 641 MobiDBLite consensus disorder prediction 368 382 - -
Dod02g2917 641 MobiDBLite consensus disorder prediction 365 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2917 Dod-Chr2 61582567 61586354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2917 45 558 Trihelix Transcription Factor Family AT1G76890 47.834 1.03e-143 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod02g2917 Myb_DNA-bind_4 7.6e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2917 - - gsj:114370603 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2917 02 61582567 61586354 Dod06g0889 06 11314688 11318654 PCT