Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2864 ATGCTAAAGGCAGAACCATTCTATCTGAACCTAAAACCCGAAAACAGAGTAAGGCGCAGCCACAGCAACAACAACAACAACACAATCACGGCATCATCACCTTCTTCTTCTTCTTCTTCAATGGCGGGAGCTACAGGAAGAACCCTCTTCACCCTCTCAATCTCTTCATCCTCCTCCTCCTTCAACCGCCTCTCTCACCGCTCCAACCTCTTTCCACTCCTCACACACTCCAAACCTCTCCTCACCACCACCACTGCTCTACCATCTCGGTTCCGACCCCTCTGCTCCTCCGTCGCAACCTCCGCCCCTGAAACCTCTGACCCCGCCGACCAGATGAAGCACTCAGTCCTCCTCGAGAGGCTCAGAATCAGGCACCTCAAGGACAGTACTTCCAAAGCCCCAGAACCCAAAAGGGACCCACAAAAGAAGGCTTCTTCTGCATCTTATGGTCAGGGTGAGAGTTTTGGTGTGGTGGCGAGTAATAATAAGAAGAAGAAGATTGTTGGGAGTTTTGAGGAGCTGGGTTTGAGTGAAGAGGTTATGGGGGCTGTTAGGGAAATGGGTATTGAAGTTCCCACTGAGATACAGTGTATTGGTGTCCCTTCTGTGTTGGAAGGGCAAAGTGTGGTGTTGGGTTCTCACACTGGCTCTGGCAAGACTCTTGCTTACTTGCTTCCCCTTGTTCAGTTGCTAAGACGTGATGAACAGTTGAATGGAATACAGTTGAAGCCTAGGCGGCCTCAAGCTGTTGTGCTATGCCCTACAAGGGAGTTGTCTGAGCAGGTTTTCCGAGTAGCAAAATCGATAAGCCATCATGCGCGATTCAGGTGTACTATGGTAAGTGGCGGTGGCCGTCTTAGGCCTCAGGAGGATTCACTTAATAACCCCATTGATATGGTAGTTGGGACCCCTGGCAGGATTCTTCAGCATATTGAGGAGGGCAACATGGTATATGGTAACATCAAATACTTGGTATTGGACGAGGCAGACACAATGTTTGATCGGGGCTTTGGTCCTGATATACGCAAATTTTTAGGCCCATTGAAACACCGTGCATCAAAATCTGATGGCCTAGGTTTTCAGACTGTCTTGGTAACTGCAACAATGACTAAGGCTGTGCAAAAGCTGATTGATGAGGAGTTTCAAGGAATTGTACATCTGCGCACATCAACACTGCATAAAAAGATCTCTTCTGCTCGTCATGATTTTATTAACCTTTCGGGTTCTGAAAACAAGCTGGAAGCATTACTTCAGGTACTCGAGCCAAGCTTGGCAAAGGGCAACAGGGTGATGGTTTTCTGCAATACTTTGGATTCTAGCCGCGCTGTGGATCACTTTCTTGGTGAAAATCAGATTTCTACTGTCAACTACCATGGGGAGGTACCTGCAGAGCAAAGGGTTGAAAACCTCAGGAAGTTTAAGAGTGACGGTGATGATTGTCCTACATTGGTTTGCACAGACTTGGCTGCTAGGGGTCTAGACTTGGATGTAGATCATGTTGTCATGTTTGACTTCCCACTGAACTCTATCGACTACCTTCATCGCACAGGTAGAACTGCTCGTATGGGTGCAAAAGGGAAAGTAACTAGTTTGGTTACTAAAAAGGACTTGATCTTGGCCACCAGAATAGAGGAGGCAATGAGGAAGAATGAGAGTTTGGAGGCTATCACCAAAGAAAGTGTTCGAAGGGATATTGCCAGGACCCAAATCACTGGGCAGAGGGTAAAGGACAGAAAATTGGTTAAAGTTTCAAAAGTCAAGAACAGTTCTGATGGTCATGCTAGTTCAGGAAATAAGGGGCCAGGTTTAAGATCCGGAAAAGGATCGCCTTCAGGAAAATCTATGAAGAAAGGGATTAAAGTTTCTAATCCTGTAAAGTCTTCCAATTCAAGTAGCATGAGAAAAGCTTCCTCAGGGAATAAGCAAACAAGCAAAAGGGCTGTTGCCGCCAAATCTACAAATTCTAAACTCAGTGTTGTGGGGTTTAGGGGGCGGAATTCATCATCAAACAAGAGACAATCTTTGTGA 2028 0.4655 MLKAEPFYLNLKPENRVRRSHSNNNNNTITASSPSSSSSSMAGATGRTLFTLSISSSSSSFNRLSHRSNLFPLLTHSKPLLTTTTALPSRFRPLCSSVATSAPETSDPADQMKHSVLLERLRIRHLKDSTSKAPEPKRDPQKKASSASYGQGESFGVVASNNKKKKIVGSFEELGLSEEVMGAVREMGIEVPTEIQCIGVPSVLEGQSVVLGSHTGSGKTLAYLLPLVQLLRRDEQLNGIQLKPRRPQAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRLRPQEDSLNNPIDMVVGTPGRILQHIEEGNMVYGNIKYLVLDEADTMFDRGFGPDIRKFLGPLKHRASKSDGLGFQTVLVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKISSARHDFINLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHFLGENQISTVNYHGEVPAEQRVENLRKFKSDGDDCPTLVCTDLAARGLDLDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVTKKDLILATRIEEAMRKNESLEAITKESVRRDIARTQITGQRVKDRKLVKVSKVKNSSDGHASSGNKGPGLRSGKGSPSGKSMKKGIKVSNPVKSSNSSSMRKASSGNKQTSKRAVAAKSTNSKLSVVGFRGRNSSSNKRQSL* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2864 675 MobiDBLite consensus disorder prediction 124 150 - -
Dod02g2864 675 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 73 598 - -
Dod02g2864 675 MobiDBLite consensus disorder prediction 621 675 - -
Dod02g2864 675 CDD SF2_C_DEAD 400 532 - -
Dod02g2864 675 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 412 565 IPR001650 -
Dod02g2864 675 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 169 197 IPR014014 GO:0003724
Dod02g2864 675 MobiDBLite consensus disorder prediction 574 675 - -
Dod02g2864 675 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 200 387 IPR014001 -
Dod02g2864 675 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 246 543 IPR027417 -
Dod02g2864 675 Pfam DEAD/DEAH box helicase 193 376 IPR011545 GO:0003676|GO:0005524
Dod02g2864 675 Pfam Helicase conserved C-terminal domain 412 523 IPR001650 -
Dod02g2864 675 Gene3D - 133 388 IPR027417 -
Dod02g2864 675 MobiDBLite consensus disorder prediction 20 43 - -
Dod02g2864 675 MobiDBLite consensus disorder prediction 14 43 - -
Dod02g2864 675 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 39 73 598 - -
Dod02g2864 675 Gene3D - 393 596 IPR027417 -
Dod02g2864 675 MobiDBLite consensus disorder prediction 124 142 - -
Dod02g2864 675 CDD DEADc 180 379 - -
Dod02g2864 675 SMART ultradead3 188 397 IPR014001 -
Dod02g2864 675 SMART helicmild6 441 523 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2864 Dod-Chr2 60852011 60857856 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2864 168 545 Eukaryotic Initiation Factors Gene Family AT3G19760 28.052 4.22e-42 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2864 - - gmx:100805709 887.871