Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2860 ATGGATTTCAGTGAGGGTCATGTATCAAAAGAACATCGCGAGCTTCATAGATCTGTAGCAGAAAGTGCAGATCCAATATCTGTTTCTCAACTAAGAATTTCTCCCAAGTCACCAAGATCTCCTAAATCTCCAAGGTCTCCTAAATCTCCAGGGTTTTCTAAATCTCCAAGGTCGCCAAAGGTGCTAGGCAAGTCCAGCAATCCAAGTCCAAAGAATTTTAGGCAATCACATTCCCCTAGAGATGGACGTCCAAAGAAAGGTGGTTCTGGGGGAAAAGGTACTTGGGGTGGATTACTTGATACAGATGACACGAATTCTCTTGACCCCAATGACCCAAACTATGACAGCAGTGAGGAGTGTGACTGTTCAAATGAAAAGAAAACGCCAACGGAGCTGGAGGAATACAAGAAAAAGGTTACAATAATATTGGAGGAATACTTTGCAACTGATGATGTTGTTGCAACAATAAATGAACTCAGAGAACTTGGAAAACCGGAGTATAGCTACTATTTTGTCAAAAAGCTTGTGTCTATGTCAATGGACAGACATGACAAAGAAAAAGAGATGGCTGCTATTCTGTTATCTGCACTCTATGCTGACACATTCCACCCTTCACAAGTATACAAAGGCTTCAGCAAATTAGTTGAATCAGCAGATGATTTGATTGTAGATATACCGGACACGGTTGATGTTCTAGCACTTTTTTTAGCTAGAGCTGTTGTTGATGACATACTTCCTCCTGCATTTTTGAAGAAACAGATGGCCTACTTACCCAAAGATTCAAAAGGGGTTGAGGTCTTGAAGAAAGCTGAGAAAAGCTACCTAGCAGCCCCTCTACATGCAGAAATCATAGAGCGGCGCTGGGGAGGTAGTAAGAATATGACAGTTGATGATGTGAAGTCTAGGATAAACAATTTCTTGAAGGAGTACGTGGTAAGTGGTGACAACAAAGAAGCCTTCAGGTGCATCAAGGATTTGCAAGTTCCTTTTTTCCATCATGAGATAGTGAAAAGGGCTCTCATAATGGCAATGGAGAGGCGTCAAGCTGAAGCTCCACTACTAGACCTGTTGAAGGAGGCTTCTGAAGAAGGTTTCATCAACTCTAGCCAAATCACTAAAGGGTTCAGTCGGTTGATTGATACTGTTGATGACTTATCGCTTGACATACCGAATGCGCGTGGAATTCTGCAGCAGCTGATGTCTAAAGCAGCATCTGAGGGCTGGTTGTGCGTGTCATCTTTGAAATCACTTTCAGTGGAGCCAGAAAGAAACTCAATAAAAGATAGTGCTGCCAGAAGTTTCAAGATAAAGTCTCAGTCCATCATTCAGGAGTACTTTTTATCTGGTGACATACTGGAGGTAAATAGTTGTCTAGAACAAGAGAACAGCAGCAACTGTGCTGAACTCAATGCAATCTTTGTTAAGAAACTGATAACTCTGGCAATGGACAGGAAGAATAGGGAGAAGGAAATGGCTTCTGTGTTGCTTTCATCTCTGTGTTTCCCAGCTGATGATGTTGTCAGTGGCTTTGTGATGTTGATGGAGTCAGCAGATGACACTGCACTGGACAATCCTGTTGTTGTTGAGGATCTTGCTATGTTTCTAGCCAGAGCAGAAGTGGATGAAGTCCTGGCACCACAGCACCTGGAAGAGATTGGAACTCAGTGTCTGGGGACTGATTCAATTGGGAGCAAAGTGCTTCAAATGGCGAAATCATCGCTAAACGCTAGGCTTTCTGGGGAGCGAATCTTGAGGTGCTGGGGTGGCGGGGGAAGCAGCAGGCCCGGATGGGCTGTTGAGGATGTCAAGGACAAGGTTGGGAAGCTGTTGGAAGAGTATGAGTCTGGTGGCGACATAAGGGAGGCTTGTCGCTGCATAAAAGAGTTAGGAATGCCGTTTTTCCACCATGAGGTTGTTAAGAAAGCCTTGGTGGCAATCATGGAGAAGAAGAATGAGAGGTTGTGGGGTTTACTCAAGGAGTGTTTTGAGTCGGGACTAATAACCATGAACCAAATGGTGAAGGGCTTTGGAAGGGTTGCAGAAACTCTTGATGACTTGGCTTTGGATGTCCCTGATGCTAAAACTCAGTTTGCAAAATATGTTGAACGAGCAAAGAATAAAGGATGGTTGGACAATGCATTTGGTTTTGGCAAACAGGAGAATGCAACAGAGAATGGCACTTGCTAA 2187 0.4376 MDFSEGHVSKEHRELHRSVAESADPISVSQLRISPKSPRSPKSPRSPKSPGFSKSPRSPKVLGKSSNPSPKNFRQSHSPRDGRPKKGGSGGKGTWGGLLDTDDTNSLDPNDPNYDSSEECDCSNEKKTPTELEEYKKKVTIILEEYFATDDVVATINELRELGKPEYSYYFVKKLVSMSMDRHDKEKEMAAILLSALYADTFHPSQVYKGFSKLVESADDLIVDIPDTVDVLALFLARAVVDDILPPAFLKKQMAYLPKDSKGVEVLKKAEKSYLAAPLHAEIIERRWGGSKNMTVDDVKSRINNFLKEYVVSGDNKEAFRCIKDLQVPFFHHEIVKRALIMAMERRQAEAPLLDLLKEASEEGFINSSQITKGFSRLIDTVDDLSLDIPNARGILQQLMSKAASEGWLCVSSLKSLSVEPERNSIKDSAARSFKIKSQSIIQEYFLSGDILEVNSCLEQENSSNCAELNAIFVKKLITLAMDRKNREKEMASVLLSSLCFPADDVVSGFVMLMESADDTALDNPVVVEDLAMFLARAEVDEVLAPQHLEEIGTQCLGTDSIGSKVLQMAKSSLNARLSGERILRCWGGGGSSRPGWAVEDVKDKVGKLLEEYESGGDIREACRCIKELGMPFFHHEVVKKALVAIMEKKNERLWGLLKECFESGLITMNQMVKGFGRVAETLDDLALDVPDAKTQFAKYVERAKNKGWLDNAFGFGKQENATENGTC* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2860 728 SUPERFAMILY ARM repeat 431 591 IPR016024 -
Dod02g2860 728 MobiDBLite consensus disorder prediction 1 20 - -
Dod02g2860 728 MobiDBLite consensus disorder prediction 99 117 - -
Dod02g2860 728 SUPERFAMILY ARM repeat 130 293 IPR016024 -
Dod02g2860 728 Gene3D - 424 577 - -
Dod02g2860 728 Gene3D - 121 275 - -
Dod02g2860 728 Pfam MA3 domain 603 711 IPR003891 -
Dod02g2860 728 Pfam MA3 domain 435 544 IPR003891 -
Dod02g2860 728 Pfam MA3 domain 300 409 IPR003891 -
Dod02g2860 728 Pfam MA3 domain 136 246 IPR003891 -
Dod02g2860 728 SUPERFAMILY ARM repeat 598 715 IPR016024 -
Dod02g2860 728 MobiDBLite consensus disorder prediction 23 39 - -
Dod02g2860 728 MobiDBLite consensus disorder prediction 1 129 - -
Dod02g2860 728 PANTHER MA3 DOMAIN-CONTAINING PROTEIN 1 721 - -
Dod02g2860 728 ProSiteProfiles MI domain profile. 433 554 IPR003891 -
Dod02g2860 728 ProSiteProfiles MI domain profile. 601 720 IPR003891 -
Dod02g2860 728 MobiDBLite consensus disorder prediction 46 75 - -
Dod02g2860 728 SMART ma3_7 299 410 IPR003891 -
Dod02g2860 728 SMART ma3_7 434 545 IPR003891 -
Dod02g2860 728 SMART ma3_7 602 711 IPR003891 -
Dod02g2860 728 SMART ma3_7 135 246 IPR003891 -
Dod02g2860 728 SUPERFAMILY ARM repeat 294 415 IPR016024 -
Dod02g2860 728 ProSiteProfiles MI domain profile. 134 255 IPR003891 -
Dod02g2860 728 Gene3D - 285 417 - -
Dod02g2860 728 Gene3D - 585 715 - -
Dod02g2860 728 ProSiteProfiles MI domain profile. 298 419 IPR003891 -
Dod02g2860 728 PANTHER PROGRAMMED CELL DEATH 4 1 721 IPR039778 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2860 Dod-Chr2 60833643 60836460 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2860 593 711 Eukaryotic Initiation Factors Gene Family AT5G57870 31.148 1.63e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2860 - - gmx:102668745 1194.87