Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2859 ATGGAACCGAAAAAGCCAGCATTTTCAAGTTTGGACACAGCCTCTTTTGCTGATGCTGTTACTCTAGCGAAGATTTTTTATGACTCGATGGATGCAGGATATCAATTCTACCTAACTGATGAGGAACTAGTGTTGTTCTATTTGAAGAGAAAGATTTGTGGCTTGGAAAAGGACCTCGAGATGATTCCTGTGATTGATATTTATAAGTGTAACCCGGAGGATTTGCTTGCGCATACTATACTGCAAAATGATGATGGGAAGAACAGCGATTGGTTCTTCTTCAGTCCTATTGCAAAGGACCATACCAACGAGGAATGGTTCCACAGAACAAGCGAACAAGGGTATTGGGAAACCACCGGAAAGGATCATGTTCTGACATGGGATTCTCGTACAATTGGTTTCAAGAAGACATTCGTTTATTACGAACGCAAAACCGGTCAAACCAGCTGGTTTATGCATCAATACACCTTGCATGAAGAGGAGCTTAAGCGATGTGAGAAAGTTCAGGACCTCTACATTCTTTGCAAGGTTTTCAAGAAGAAGGGACCCAGTGCACTAGTTGTCAAAGAAGGTTCTGAGAATGATAACACTACTATGGGGATTGATGTTAAATCATCCGGTGATATTGAGGATTTGATGGATGTTGATGATTTTCATCGTGATCTGAATAGCATTTTGTTTGGGCCTATTCATGCACCTGCCCCTCATCCTATCCCTGAGCTGCATGTTGATGCTTATTTTATGATACCTCAGATTAATCCTGATCATCCACAAAATGCTGAGGGGGAGGTATTCCCTGTGCCTGTGCCTGTGCCTGAGCCTATGCTTGTGCCTGTGCCTGTGCCTGTGCCTGTACCTGAGCCTCCCATGAATGCCCTTCCACTTCCAGATGGAAATGGAAATGGTGGCCAGCCACATGGAGCACCACCCCAGCAAGAAAATCATCCTCCAACTGACATTCATAATGAGGAGATTCAAGCTCATCAGCTTGACATGAGTGAGATTTCGGAAGTTGATGATGATTTTGTTGATCCTCTTCCTGAATTTCCAAATGAAGAAGACCCTCTGCAGAATGTAGAGCTGGTTGAAGACAGTGGTGTTCTTCTCATTGACCCGTATGCTATTCCAGGGATGGTCTATGTCGGGGAATGTCCACAGTGA 1161 0.4401 MEPKKPAFSSLDTASFADAVTLAKIFYDSMDAGYQFYLTDEELVLFYLKRKICGLEKDLEMIPVIDIYKCNPEDLLAHTILQNDDGKNSDWFFFSPIAKDHTNEEWFHRTSEQGYWETTGKDHVLTWDSRTIGFKKTFVYYERKTGQTSWFMHQYTLHEEELKRCEKVQDLYILCKVFKKKGPSALVVKEGSENDNTTMGIDVKSSGDIEDLMDVDDFHRDLNSILFGPIHAPAPHPIPELHVDAYFMIPQINPDHPQNAEGEVFPVPVPVPEPMLVPVPVPVPVPEPPMNALPLPDGNGNGGQPHGAPPQQENHPPTDIHNEEIQAHQLDMSEISEVDDDFVDPLPEFPNEEDPLQNVELVEDSGVLLIDPYAIPGMVYVGECPQ* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2859 386 Pfam No apical meristem (NAM) protein 32 157 IPR003441 GO:0003677|GO:0006355
Dod02g2859 386 Gene3D NAC domain 39 183 IPR036093 GO:0003677|GO:0006355
Dod02g2859 386 ProSiteProfiles NAC domain profile. 30 180 IPR003441 GO:0003677|GO:0006355
Dod02g2859 386 SUPERFAMILY NAC domain 28 180 IPR036093 GO:0003677|GO:0006355
Dod02g2859 386 MobiDBLite consensus disorder prediction 288 319 - -
Dod02g2859 386 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86 32 199 - -
Dod02g2859 386 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 32 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2859 Dod-Chr2 60812390 60816050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2859 33 182 NAC Transcription Factor Family AT1G34190 43.791 2.18e-41 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod02g2859 NAM 3.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2859 - - bvg:104909031 159.073