Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2844 ATGGAAAACCTTCCCCGATTGATTTACAAAAACCCCATTAAGAGAACCTCAAGGGGATCTTCAACCTATCTTGGTGTCAGAAGAAGGCCATGGGGAAGGTATGCTGCAGAGATAAGGAACCCTTATACCAAAGAGAGACACTGGCTAGGCACATTTGACACTGCTGAAGAGGCTGCCATAGCTTATGATCTTTCATCCATCAAGATGTGTGGCATTGAAAATGCTCGCACAAATTTCCATTACCCTTTTGTGCAACTTCCTCCTCCTTCTATGTCATTGTGTTTGCCACCACCAACAACAACCTCAGAGTTGGAAGCAAGTGATAATGGAGTTAAGAGGAATGCAGTTGGTGATAGTGATGGTGATGATGAATCTCTAGTTATTGCTTCCATCTTGCAAAGTTTTTCTTGTTCCGGAAACTGTTCTCTTTAG 432 0.4282 MENLPRLIYKNPIKRTSRGSSTYLGVRRRPWGRYAAEIRNPYTKERHWLGTFDTAEEAAIAYDLSSIKMCGIENARTNFHYPFVQLPPPSMSLCLPPPTTTSELEASDNGVKRNAVGDSDGDDESLVIASILQSFSCSGNCSL* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2844 143 ProSiteProfiles CUT domain profile. 1 64 IPR003350 GO:0003677
Dod02g2844 143 SUPERFAMILY DNA-binding domain 21 81 IPR016177 GO:0003677
Dod02g2844 143 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Dod02g2844 143 Pfam AP2 domain 23 71 IPR001471 GO:0003700|GO:0006355
Dod02g2844 143 ProSiteProfiles AP2/ERF domain profile. 22 80 IPR001471 GO:0003700|GO:0006355
Dod02g2844 143 SMART rav1_2 22 86 IPR001471 GO:0003700|GO:0006355
Dod02g2844 143 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Dod02g2844 143 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Dod02g2844 143 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 134 - -
Dod02g2844 143 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF088 1 134 - -
Dod02g2844 143 MobiDBLite consensus disorder prediction 98 121 - -
Dod02g2844 143 CDD AP2 21 79 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2844 Dod-Chr2 60681083 60681514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2844 10 90 AP2-EREBP Transcription Factor Family AT5G13910 61.728 5.67e-27 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod02g2844 AP2 4.8e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2844 - - gmx:100816937 191.045