Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2842 ATGTCACTGACGAACATTTCTGCTCTCCAAGTGCTGGATTTGTCTAATAACCGTCTCTCAGGTGTGGTTCCCGATAACGGCTCCTTCTCGTTATTCACTCCTATCAGTTTTACCAACAACTTGGATTTATGTGGCCCAGTCACTGGGCACCCTTGTCCAGGGTCTCCACCATTTTCTCCTCCTCCCCCTTTTGTCCCACCTGCCCCCATTTCAAACCCAGGAGGTAAGAGTGCCACTGGTGCAATAGCTGGAGGAGTTGCTGCAGGTGCTGCCCTGTTATTTGCTGCTCCTGCACTTGCGTTTGCATGGTGGCGTCGAAGGAAACCACAAGAATTTTTCTTTGATGTGCCTGCTGAAGAGGATCCTGAAGTACATCTTGGGCAGCTTAAGAGGTTCTCGCTACGAGAACTGCAAGTTGCAACAGATACATTCAGCAATAAGAACATTCTTGGAAGAGGAGGATTTGGTAAGGTGTACAAAGGACGCTTGACCGATGGTTCATTGGTTGCTGTGAAAAGATTGAAAGAGGAGCGCACACCTGGAGGTGAGCTTCAGTTTCAGACCGAAGTAGAGATGATCAGCATGGCAGTGCATCGGAATCTCCTCCGCTTACGTGGGTTCTGTATGACACCAACTGAAAGGCTGCTTGTTTATCCTTACATGGCTAACGGAAGTGTTGCCTCATGCTTGAGAGAGCGTCCAGAACATCAACAGCCCCTAGACTGGCCAACAAGGAAACGAATAGCTTTGGGATCAGCAAGGGGTCTTTCATATTTGCACGATCACTGCGACCCAAAGATTATCCATCGTGATGTGAAGGCTGCAAACATATTGTTGGATGAGGAGTTCGAGGCTGTTGTTGGGGACTTTGGGTTGGCTAAACTGATGGATTACAAGGACACCCATGTCACAACTGCTGTACGAGGCACAATTGGGCACATAGCTCCAGAGTACCTATCTACTGGTAAATCTTCAGAGAAAACAGATGTTTTCGGGTATGGTATAATGCTTCTGGAGCTGATCACTGGACAAAGAGCTTTTGACCTAGCGCGACTTGCAAATGATGATGATGTTATGCTGCTTGATTGGGTAAAAGGACTTCTGAAAGAAAAGAAGTTAGAAATGCTGGTTGATCCTGATCTGCATAACAATTACATAGAAGCTGAGGTAGAACAGTTAATTCAAGTTGCATTGCTCTGCACCCAAGGTTCCCCTATGGACCGGCCTAAAATGTCAGAAGTGGTGCGAATGCTTGAAGGCGATGGCTTGGCAGAGAGATGGGATGAGTGGCAAAAGGTGGAAGTTCTCCGGCAGGAGGTGGAGTTGGCCCCTCATCCCAATTCCGACTGGATTGTTGACTCAACTGAAAATCTACATGCAGTTGAGTTATCTGGTCCAAGCCGGCTCAACCACAACAGCATGACAGGTTCTATTCCCATGTCTCTGACTAAAATTTCAACTCTCAATGGGCTGGATTTGTCTAATAACCGTCTTTCAGGTGTGGTTCCCAATAATGGCTCCTTCTCGAAATTAACTCCTGTCAGTTTTGCCAACAACTTGGATCTATGTGGCCCAGTCGCTGGACACCCTTGTCCAGGGTCTTCTCCATTTTCTCCTCCTCCCCCTTTTGTCCCACCAACCCCAGTTTCAGCTTCAGGAGGTAATATTGCTAGTGCTGCGATAGCCGAAGGAGCTGCTGCATGTGCAGCACTGTTATTTGCAAGCTCTTGCAGTGGCATTTGCATGGTGAGGATCCTGAAGTGCATCTTGGGCATCTTAAGAGGTTCTCACTACGAGAACTGCAAGTTGCAACGGATAATTTCAGCAATAAGAACATTCTTGGAAAAGGGTGGATTCGGCAAGGTGTACAAAGGACGCTTGGCAGATCGTTCATTGGTTGCAGTGAAAAGATTGAAAGAGGAGCGCACAACTGGTGGTGAGCTTCAGTTTCAGACAGAAGTAGAGATGATCAGCATGGCTGTGCATCGAAATCTCCTCCGTCTACATGGCTTCTGTATTACGTCAACTGAAAGGGTACTTGTTTATCCTTACATGGTTAATGGAAGTGTTGCTTCATGCCTCAGAGATCGCCCGGCACATCAACAGCCACTAGATTGGCCCACAAGGAAACGAATTGCTTTGGGATCAGCAAGGGGTCTCTCATATTTGCATGATCATTGCGACCCGAAGATTATTCATCGTGATGTGAAAGCTGCGAACATATTGTCGGACGAGGATTTTGAGGCTGTTGTTGGGGACTTCGGGTTGGCTAAACTGATGGACTATAAGAACACCCATGTTACAACTGCTGTAAGAGGAAAAATTGGCCACATAGCTCCAGAATATCTGTCTACTGGTAAATCTTCAGAGAAAACCGATGTCTTTCGGTATGGACATCTGAAAGAATACAAGTTAGAAATACTGGTTGATCCTGATCTACGTAACAATCACATAGAAGCTGAGATAGAGCAGTTGATTCAGGTTGCATTGCTCTGCACTCAAGTTTCCCTTATGGACCGGCCTAAAATGTCGGAGGTGGTTCGAATGCTTGAAGGCGATGGCTTGGCACAAAAATGGGATGAGTGGCAGAAGGTGGAAGCTCTCCAGCATGAGCTGAAGCTGGCCTCTCATCCCAATTTTGATTGGATCATTGACTCCACTGAAAATCTACAAGCAGTTGAGTTGTCTGGTCCAAGATAG 2700 0.4681 MSLTNISALQVLDLSNNRLSGVVPDNGSFSLFTPISFTNNLDLCGPVTGHPCPGSPPFSPPPPFVPPAPISNPGGKSATGAIAGGVAAGAALLFAAPALAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDTFSNKNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEHQQPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLHNNYIEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPHPNSDWIVDSTENLHAVELSGPSRLNHNSMTGSIPMSLTKISTLNGLDLSNNRLSGVVPNNGSFSKLTPVSFANNLDLCGPVAGHPCPGSSPFSPPPPFVPPTPVSASGGNIASAAIAEGAAACAALLFASSCSGICMVRILKCILGILRGSHYENCKLQRIISAIRTFLEKGGFGKVYKGRLADRSLVAVKRLKEERTTGGELQFQTEVEMISMAVHRNLLRLHGFCITSTERVLVYPYMVNGSVASCLRDRPAHQQPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILSDEDFEAVVGDFGLAKLMDYKNTHVTTAVRGKIGHIAPEYLSTGKSSEKTDVFRYGHLKEYKLEILVDPDLRNNHIEAEIEQLIQVALLCTQVSLMDRPKMSEVVRMLEGDGLAQKWDEWQKVEALQHELKLASHPNFDWIIDSTENLQAVELSGPR* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2842 899 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 468 798 IPR031048 GO:0004675|GO:0005102|GO:0006468
Dod02g2842 899 SUPERFAMILY Protein kinase-like (PK-like) 123 419 IPR011009 -
Dod02g2842 899 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 468 798 - -
Dod02g2842 899 ProSiteProfiles Protein kinase domain profile. 144 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2842 899 Gene3D Ribonuclease Inhibitor 442 536 IPR032675 -
Dod02g2842 899 Gene3D Ribonuclease Inhibitor 1 56 IPR032675 -
Dod02g2842 899 SUPERFAMILY Protein kinase-like (PK-like) 612 851 IPR011009 -
Dod02g2842 899 ProSitePatterns Protein kinases ATP-binding region signature. 150 172 IPR017441 GO:0005524
Dod02g2842 899 Pfam Protein tyrosine and serine/threonine kinase 613 799 IPR001245 GO:0004672|GO:0006468
Dod02g2842 899 Gene3D Phosphorylase Kinase; domain 1 593 684 - -
Dod02g2842 899 Gene3D Phosphorylase Kinase; domain 1 113 220 - -
Dod02g2842 899 SMART serkin_6 608 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2842 899 SMART serkin_6 144 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2842 899 Gene3D Transferase(Phosphotransferase) domain 1 221 438 - -
Dod02g2842 899 Gene3D Transferase(Phosphotransferase) domain 1 685 870 - -
Dod02g2842 899 ProSiteProfiles Protein kinase domain profile. 608 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2842 899 SUPERFAMILY L domain-like 3 522 - -
Dod02g2842 899 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Dod02g2842 899 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 1 466 - -
Dod02g2842 899 PRINTS Leucine-rich repeat signature 9 22 - -
Dod02g2842 899 PRINTS Leucine-rich repeat signature 485 498 - -
Dod02g2842 899 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 1 466 IPR031048 GO:0004675|GO:0005102|GO:0006468
Dod02g2842 899 Pfam Protein kinase domain 145 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2842 899 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 798 899 IPR031048 GO:0004675|GO:0005102|GO:0006468
Dod02g2842 899 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 798 899 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2842 Dod-Chr2 60652160 60661986 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2842 468 899 Receptor kinase-like Gene Family AT1G71830 67.850 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dod02g2842 Pkinase 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2842 K13418 - gmx:100789884 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2842 02 60652160 60661986 Dod06g0952 06 12085121 12095609 PCT