Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2807 ATGCACGGGAAAATCGCGGAGACAAAGATTAAAAGAATGATTGAGCCAACCTTCGTCGACGAAATGGACTGCGGCAGCTTCTTCGACGACCTCCTGGATTTCCCCGCCGACGAAGCAGCCACTGCCGACGCCTACCTGCCGGTGGACGCCGCCGAGAACTTCAAATCTCCTGCGGCGAGTTTCTGGCAGGCCGCCGAGACCGACGCCCTGCCGGCCTCCGACTCGGCTTTTGCCCGTGACCCCGCCGCGACGGACCTCTCGGCGGAGCTCTCCGTTCCGTATGAAGACATTGTGCAATTGGAATGGCTGTCCAATTTTGTGGAGGACTCTTTTTCTGGTGGGAGCCTCACCATGAAGAAAGTGGAGCCATCCTGCATCACCACCACCACCAATGAAGACTTGACTCATACCCAATTCCAGATATCCAGCCCAGTTTCTGTCCTTGAGAGCAGTAACTCCTGCTCCGGCGACAAGATCGCCCCTCGCAGCCCGGAGATTTGTATCCCTGTGCCTTGTGTACGCGCACGTAGCAAGCGCCACCGCCCTGCAACATTCAACCCTCACCCCGTGATGCAACTCATCTCCCCTGCTTCCTCTGTTGGCGAGAACGTGCAGCCTAATGTGACTTCCAAGGCCTCTTCAGATTCTGAGAATTTCGCAGAGTCTCATCCAGTGATCAAGTTGCCAAGGCAAGGTTCTGGAGAGCATAAGAAGAAAAAGAAAACCAAAGTGCCAAATCCTTTAGCCCAAGATGAGACTAATCAGAATGCATCAGTGCAAGCAGTTAGGAAATGTATGCACTGTGAGATAACCAAGACACCACAGTGGAGGGCAGGGCCAATGGGCCCGAAAACACTCTGCAACGCCTGCGGTGTTCGCTACAAGTCAGGCCGGTTATTCCCTGAATACCGGCCGGCTGCGAGCCCAACTTTTTGCCCGGCGGTGCACTCCAATTCCCATAAGAAGGTCCTTGAAATGAGAAATAAGATGGGGCAGGAACCTGTCTTCGCAACTGATTCAGCTACCTTTCCAGAACTCATTCCAAACACTAACGGAGGACTTGCCTTGGAATACATGTGA 1080 0.5389 MHGKIAETKIKRMIEPTFVDEMDCGSFFDDLLDFPADEAATADAYLPVDAAENFKSPAASFWQAAETDALPASDSAFARDPAATDLSAELSVPYEDIVQLEWLSNFVEDSFSGGSLTMKKVEPSCITTTTNEDLTHTQFQISSPVSVLESSNSCSGDKIAPRSPEICIPVPCVRARSKRHRPATFNPHPVMQLISPASSVGENVQPNVTSKASSDSENFAESHPVIKLPRQGSGEHKKKKKTKVPNPLAQDETNQNASVQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPAVHSNSHKKVLEMRNKMGQEPVFATDSATFPELIPNTNGGLALEYM* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2807 359 MobiDBLite consensus disorder prediction 200 255 - -
Dod02g2807 359 PANTHER GATA TRANSCRIPTION FACTOR 13 359 - -
Dod02g2807 359 PIRSF Txn_fac_GATA_plant 14 347 IPR016679 GO:0003677|GO:0005634|GO:0045893
Dod02g2807 359 ProSiteProfiles GATA-type zinc finger domain profile. 259 295 IPR000679 GO:0006355|GO:0043565
Dod02g2807 359 SMART GATA_3 259 309 IPR000679 GO:0006355|GO:0043565
Dod02g2807 359 CDD ZnF_GATA 264 321 IPR000679 GO:0006355|GO:0043565
Dod02g2807 359 Pfam GATA zinc finger 265 298 IPR000679 GO:0006355|GO:0043565
Dod02g2807 359 PANTHER GATA TRANSCRIPTION FACTOR 8 13 359 - -
Dod02g2807 359 MobiDBLite consensus disorder prediction 200 220 - -
Dod02g2807 359 ProSitePatterns GATA-type zinc finger domain. 265 290 IPR000679 GO:0006355|GO:0043565
Dod02g2807 359 Gene3D - 260 309 IPR013088 GO:0006355|GO:0008270
Dod02g2807 359 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 263 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2807 Dod-Chr2 60331606 60334604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2807 262 350 C2C2-Gata Transcription Factor Family AT3G54810 75.281 1.36e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Dod02g2807 GATA 6.2e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2807 - - gmx:100792644 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2807 02 60331606 60334604 Dod06g1040 06 13326588 13330252 PCT