Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2806 ATGCCACAATTGTTTTTACATCAATTTGAAGGACCAAAATTTTGTAGTATTCAGATGTTTGGGGCCTCAGAAAGGTGCTTGGATTCTCAATTATGGCATGCTTGTGCTGGTGCCATGGTTCAATTGCCACCACTAAACTCAAAAGTCTTGTATTTTCCTCAAGGGCATGCAGAGCATGCTCATGGGAAAGTAGATTTTGGGTACACCAGAATTCCCCCATTCATCCCTTGCAGGGTGTCTGCAATGAAATACATGGCAGAACCAGACACTGATGAGGTGTTTGTGAAATTGGGGTTGACCCCTCTGAGAGAAAATGAATTGGATTTGGAAGATGATCGTTGCTTCATGGGAATGAGTAGTGGAGTTGAGGGTCATGAGAAACAAGCTTCCTTTGCCAAGACACTGACACAATCTGATGCCAACAATGGTGGAGGGTTCTCAGTGCCTCGTTACTGTGCTGAGACCATGTTCCCAAGGTTGGATTACTCTGCTGATCCTCCTGTTCAGACCATTGTTGCCAAGGATGTGCATGGACAGTGCTGGAAGTTCAGGCATATCTATAGAGGGACCCCTAGAAGGCATCTTTTGACCACTGGATGGAGCAATTTTGTGAGCCAGAAGAAGCTTATTGCTGGGGATTCCATTGTGTTCTTGAGGGCTGAGAATGGTGATCTTTGTGTTGGGATAAGAAGGGCCAAGAAGGTGGTAATTGGTAGTGGAAGTGAGGTCTCATCTAATTGGAACAAGGTAACACCTTTACTTGGTGGGGTGCATTCTGGTTTCTTGTCTGAGAATGAGAGCATCGTGAGGAGAAAAGGGTGTGAGGAATTGGTGGGAAGGTTGGCTGCTAAATCTGTTGTTGAGGCTGTGAACTGTGCTGTTAATGGAAGGCCCTTTGAGGTTGTTTACTACCCAAGGGGAAGCACACCTGAGTATTGTGTTAAGGCCTCACTTGTGAGGGATGCAACGCAAGTTCAGTGGTGTTCTGGGATGAGGTTCAAGATGCCCTTTGAAACTGAGGATTCTTCTAGGATCAGTTGGTTCATGGGAACCATATCTTCTGTCCAGGTTGCAGATCCCATTCGCTGGCCTGATTCCCCATGGCGTCTTCTACAGGTGTTGTGGGATGAACCAGATTTACTACAAAACGTTAAGTGTGTAAACCCTTGGTTAGTTGAACTAGTCTCAAACATGCCCACCTACAATCATCTTTCTCCATTCTCACCCCCAAAAAAGAAACCAAGGTTTCTACAGAACCCAGATTTTAACCTCATCAACCAACTTCCAATGACAGCATTTTCAAGCAATCATCTCAGTCATACCAATAACTCCGTATGTAACATCCAAGACAATAGTACTTCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGACTGTCTTCATTTGATTCTCCCTTCAACAAGCTGCCGTCACAATCACACATGTCCCTTAGGCCTCTTTGTGGGGTCAACAACAGCAGCACTAAGAACAATGCTGATATATCTCTCTTGTTGACTGTTGGAAATTCTGGCCATAAGTTGAGGGAGTTACCCAATGAAGTGAAATCACCACCCCACATCTTCTTGTTTGGACAACTGATTCACACTGAACAGAAGAGTTCCGACAGTTTCTGTGCTAGTACCAATGGGAATAGTTCATCTGAAGGGACTTTGCACAAGACATCAAATGCTTCTGATGGCATGGCTTCTGCTTTGCATCCTAATAGTCCAATAGAGAATTCTTCTGATGGAGGGTCTCCCTGGTACAAAGATCAGCACAAATCTGATCTTAGAAGCAAAAATGTTAACCTGTTATGTTTGGCCTTATAG 1833 0.4468 MPQLFLHQFEGPKFCSIQMFGASERCLDSQLWHACAGAMVQLPPLNSKVLYFPQGHAEHAHGKVDFGYTRIPPFIPCRVSAMKYMAEPDTDEVFVKLGLTPLRENELDLEDDRCFMGMSSGVEGHEKQASFAKTLTQSDANNGGGFSVPRYCAETMFPRLDYSADPPVQTIVAKDVHGQCWKFRHIYRGTPRRHLLTTGWSNFVSQKKLIAGDSIVFLRAENGDLCVGIRRAKKVVIGSGSEVSSNWNKVTPLLGGVHSGFLSENESIVRRKGCEELVGRLAAKSVVEAVNCAVNGRPFEVVYYPRGSTPEYCVKASLVRDATQVQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPDSPWRLLQVLWDEPDLLQNVKCVNPWLVELVSNMPTYNHLSPFSPPKKKPRFLQNPDFNLINQLPMTAFSSNHLSHTNNSVCNIQDNSTSAGIQGARHAQFGLSSFDSPFNKLPSQSHMSLRPLCGVNNSSTKNNADISLLLTVGNSGHKLRELPNEVKSPPHIFLFGQLIHTEQKSSDSFCASTNGNSSSEGTLHKTSNASDGMASALHPNSPIENSSDGGSPWYKDQHKSDLRSKNVNLLCLAL* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2806 610 MobiDBLite consensus disorder prediction 543 595 - -
Dod02g2806 610 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 22 579 IPR044835 GO:0003677|GO:0006355|GO:0009725
Dod02g2806 610 PANTHER AUXIN RESPONSE FACTOR 16 22 579 - -
Dod02g2806 610 MobiDBLite consensus disorder prediction 543 589 - -
Dod02g2806 610 SMART B3_2 131 233 IPR003340 GO:0003677
Dod02g2806 610 Pfam B3 DNA binding domain 131 232 IPR003340 GO:0003677
Dod02g2806 610 SUPERFAMILY DNA-binding pseudobarrel domain 126 233 IPR015300 -
Dod02g2806 610 CDD B3_DNA 130 231 IPR003340 GO:0003677
Dod02g2806 610 Gene3D - 129 233 IPR015300 -
Dod02g2806 610 Pfam Auxin response factor 289 372 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Dod02g2806 610 Gene3D - 326 400 - -
Dod02g2806 610 ProSiteProfiles B3 DNA-binding domain profile. 131 233 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2806 Dod-Chr2 60321214 60324644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2806 19 596 B3 DNA Binding Superfamily AT4G30080 54.774 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Dod02g2806 B3 2.9e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2806 - - gmx:100803053 869.766