Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2792 ATGGAAGATTCAGAGGAAGATGAGTTTCTGAGCCTTAGCCTTTCTGTTGCAGCTGGTAGGGAAAGGAAAAACAAGGCAAAGAAAAGGGATCACAATAATGGTAATTCCATCATTAGTCCTATGAACTCATCCTATGAAGGCTATGAAGGGAAGATCTTTAGGCTCCTCCAAATGAGGGAGGTGATGCTAAGACAAGACCATCACAGGAGGAGCAAAGGAGTGATTGAAGATGGGAATGGCCTCCCTCTGATCCACTTGCTCCTCACAACTGCCACTGCTGTTGATGAGAACAACCTTGGTGCAGCTCTTGAGAATCTCACTGACCTTTACCAAACTGTGTCCCTAACTGGTGACTCAGTTCAGCGTGTTGTGGCCTATTTTGCAGATGGTCTTGCTGCAAGGCTCCTCACAAGGAAGTCCCCATTCTATGACATGCTCATGGAGGAGCCAACACACGAGGAAGAGTTTCTTGCATTCACTGATCTCTATAGAGTCTCACCTTACTACCAATTTGCACATTTCACTGCAAACCAGGCCATCTTGGAGGCATTTGAGGAAGAGGAAGAAAAGAACAACCGTGCACTTCATGTCATTGACTTTGATGTTTCCTATGGCTTCCAATGGCCTTCTCTTATTCAGTCACTCTCTGAGAAGGCGACAAGTGGCAACCGCATATCACTCAGGATCACAGGATTTGGGAACAACCTCAAGGAGCTTCAAGAAACTGAGTCTAGATTGGTCAGTTTCTCAAAGGGTTTTGGTAACCTTGTGTTTGAGTTCCAAGGGTTGCTAAGGGGTTCAAGGATCATGAACCTAAGGAAAAAGAAGAATGAAACCGTGGCTGTGAACCTTGTTTCCTATTTGAACACTTTGAGGAGTTTCATCAAGTTATCTGACACATTGGGATTTGTTCATTCTCTCAACCCTTCCGTAGTGGTGTTGGTGAAACAAGAAGGTAGCAGGAGCATTAGGACCTTCTTGTCAAGGTTCACAGAGTCTTTGCACTATTTTGCAGCCATGTTTGATTCACTGGATGACTGCCTTCCAATTGAGAGCACCGAGAGGCTCAGGATTGAGAAGAAGCTTCTTGGAAAAGAGATCAAGAGCATGCTCAATTGTGACATGGATGGTGTGGATTGTCCAAAATATGAGAGGATGGAAGCATGGAAAGCAAGATTGGAGAATCATGGGTTTGCTGGAGCAAAGATAAGCTCAAAGTCTTTGATCCAAGCAAAATTGCTTTTGAAGATGAGTACCCATTATAGTCCACTCCAATTTGAAGAGGAGGGTGGTGGTGGTGGTTTCAGGGTTTCTGAAAGGGATGAGGGAAGAGCCATCTCTTTGGGTTGGCAAAACAGGTTTCTTCTCACTGTTTCCGCATGGCAACCAGTGTGA 1395 0.4495 MEDSEEDEFLSLSLSVAAGRERKNKAKKRDHNNGNSIISPMNSSYEGYEGKIFRLLQMREVMLRQDHHRRSKGVIEDGNGLPLIHLLLTTATAVDENNLGAALENLTDLYQTVSLTGDSVQRVVAYFADGLAARLLTRKSPFYDMLMEEPTHEEEFLAFTDLYRVSPYYQFAHFTANQAILEAFEEEEEKNNRALHVIDFDVSYGFQWPSLIQSLSEKATSGNRISLRITGFGNNLKELQETESRLVSFSKGFGNLVFEFQGLLRGSRIMNLRKKKNETVAVNLVSYLNTLRSFIKLSDTLGFVHSLNPSVVVLVKQEGSRSIRTFLSRFTESLHYFAAMFDSLDDCLPIESTERLRIEKKLLGKEIKSMLNCDMDGVDCPKYERMEAWKARLENHGFAGAKISSKSLIQAKLLLKMSTHYSPLQFEEEGGGGGFRVSERDEGRAISLGWQNRFLLTVSAWQPV* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2792 464 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 462 IPR005202 -
Dod02g2792 464 ProSiteProfiles GRAS family profile. 74 462 IPR005202 -
Dod02g2792 464 MobiDBLite consensus disorder prediction 21 40 - -
Dod02g2792 464 Pfam GRAS domain family 83 462 IPR005202 -
Dod02g2792 464 PANTHER OSJNBA0084A10.13 PROTEIN 8 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2792 Dod-Chr2 60205538 60206932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2792 79 462 GRAS Transcription Factor Family AT1G14920 34.509 3.77e-57 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod02g2792 GRAS 6.6e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2792 - - gmx:100809458 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2792 02 60205538 60206932 Dod06g0998 06 12696301 12697686 PCT