Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2784 ATGGGGAAGATATTCCTCACACTCTTATTGATATATTCACTTTTCTCAATAGCCTCATCATCAAGAAGAGGACCATCCTCCAGCAACATAGATTGGTGGTGCAACCTTACCCCGCACCCTCAGCCATGCGAATACTACGTGAGCCAAACCAACCACCATCACACAATCAAGCACAAAACCGAGTTCAGGGCAATGCTTGTTCAGCTGGCATTGAACCAGGCAATTATCATACAAAGGGTAGCACGTGATTTTGAGCAAAACATGGTGACAAAGAACCACAAAGCTGTGCATGGTGATTGCTTGAAGCTCTATGAGAACACCATCTTCCACCTCAACCGTACCCTTGAAGGCCTCAATGGGAACAGCAAGAACTGTTCACCAGTTGATGCACAAACATGGCTCAGCACTGCTCTCACAAACATCCAAACATGTCAAACCGGGGCGGAAGAGCTCAGTGTTCAAGATTTCAAGGTGCCATCTGTGAGCACCAATGTCACTGAGATGATAAGGAACAGCTTAGCCATCAACTTGGATTTGCTGAAGCTGATGAGGCAAAATGATGGACATGATCATCACACAGAAGAAACAGAAGAAGGTGAGTTTCCAAGCTGGTTTTCTGGTCATGAGAGGAAGCTGCTGCAGGCTTCAACGATAAAGGCACATCTTGTGGTGGCGAAAGACGGCTCGGGGCAATTCAGGACTGTCCAAGATGCCCTGAATGCAGCGGCAAAGAGAAGTGTCAAGACAAGGTTTATTATACATGTGAAGAAAGGGGTTTATAGAGAGAACATTGAGGTTGATCAAAACAATGATAACATCATGCTGGTTGGTGATGGGATGAGAAATACCATAATAACCAGTAGCAGAAGTGTTCAAGATGGCTATACCACATATAGCTCCGCAACAGCTGGAATAGATGGGCTTCAGTTCATTGCACGCGACATCACCTTCCAAAACACCGCGGGTGCTCAAAAGGGTCAAGCAGTGGCAGTGAGGTCAGCCTCTGACCTCTCAGTGTTCTACAGGTGCGCCATATCAGGTTACCAAGACACCCTCATGGCTCATGCACAGCGCCAATTCTATAGGCAATGCTACATCTATGGCACCGTGGACTTCATCTTTGGTAATGCCGCAATGGTCCTCCAAAATTGCTACATTTTCGCAAGAAAGCCCTTAGATGGACAAGCCAACACGATCACGGCCCAGGGCAGAGGAGACCCATATCAGAACTCTGGAATCTCAATCCACAATTCTCAAATAAGGGCCGCACCAGACCTCAAGCCCGTAGTTGACAAGTACAGCACATTCTTGGGCCGGCCCTGGCAGCAATACTCTAGAGTAGTGGTCATGAAGACTTTCATGGACACATTGGTGAGCCCATTGGGTTGGTCTCAATGGGATAGTACTGATTTCGCTCTGGATACATTGTATTATGGAGAGTATGAGAACTATGGGCCAGGATCCACCACGAGCGGCAGAGTAAAATGGCCTGGTTTTCATGTGATAACAAACCCAGCTGAGGCAGCGCCATTCACAGTCACTAGCCTCCTTGGTGGTGGCACTTGGTTGCCTACCACATCTGTGCCATTTACCTCTGGCCTTTGA 1605 0.476 MGKIFLTLLLIYSLFSIASSSRRGPSSSNIDWWCNLTPHPQPCEYYVSQTNHHHTIKHKTEFRAMLVQLALNQAIIIQRVARDFEQNMVTKNHKAVHGDCLKLYENTIFHLNRTLEGLNGNSKNCSPVDAQTWLSTALTNIQTCQTGAEELSVQDFKVPSVSTNVTEMIRNSLAINLDLLKLMRQNDGHDHHTEETEEGEFPSWFSGHERKLLQASTIKAHLVVAKDGSGQFRTVQDALNAAAKRSVKTRFIIHVKKGVYRENIEVDQNNDNIMLVGDGMRNTIITSSRSVQDGYTTYSSATAGIDGLQFIARDITFQNTAGAQKGQAVAVRSASDLSVFYRCAISGYQDTLMAHAQRQFYRQCYIYGTVDFIFGNAAMVLQNCYIFARKPLDGQANTITAQGRGDPYQNSGISIHNSQIRAAPDLKPVVDKYSTFLGRPWQQYSRVVVMKTFMDTLVSPLGWSQWDSTDFALDTLYYGEYENYGPGSTTSGRVKWPGFHVITNPAEAAPFTVTSLLGGGTWLPTTSVPFTSGL* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2784 534 ProSitePatterns Pectinesterase signature 2. 366 375 IPR033131 -
Dod02g2784 534 SMART PMEI_2 25 175 IPR006501 GO:0004857
Dod02g2784 534 Pfam Plant invertase/pectin methylesterase inhibitor 29 175 IPR006501 GO:0004857
Dod02g2784 534 SUPERFAMILY Pectin lyase-like 216 533 IPR011050 -
Dod02g2784 534 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 177 IPR006501 GO:0004857
Dod02g2784 534 CDD PMEI-like_3 32 176 - -
Dod02g2784 534 Pfam Pectinesterase 222 519 IPR000070 GO:0030599|GO:0042545
Dod02g2784 534 PANTHER PECTINESTERASE 2 533 - -
Dod02g2784 534 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 176 IPR035513 -
Dod02g2784 534 Gene3D - 214 534 IPR012334 -
Dod02g2784 534 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 179 IPR035513 -
Dod02g2784 534 PANTHER PECTINESTERASE 2 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2784 Dod-Chr2 60026898 60029385 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2784 24 534 Carbohydrate Esterase AT3G47400 56.023 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2784 K01051 - gmx:100806133 816.224