Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2775 ATGGCGTCGTCGTCGAGCAGCGGATTGACGTTCAAGGTGCATCCGCTGGTGATCGTTAACATCTCCGATCACTACACTCGGATCAAGTGTCAGATGAACCCACCCAATTCCAATAATCCCAACAAGGATTCGAATAATTCGGGTGCTCCGCGGGTGTACGGGTGCGTGATAGGGGTGCAGAAGGGTCGCACGGTGGAGATCTTCAACAGCTTCGAGCTGCTGCACGATCCATCGACTCAGACGCTGGACCGTGCGTTCCTCGAGAAGAAGCAGGAGCTGTACAAGAAGGTGTTCCCTCACTTCTATATCCTCGGTTGGTACTCCACCGGCACCCATGCCCTCGAATCTGATATGCACATTCACAAAGCTTTGATGGATATCAACGAGAGTCCCGTTTTCGTTCTGCTGAATCCTTCAATCAATCACTCTCAGAAGGATCTCCCTGTTACTATTTATGAAAGTGAACTGCATGTCATAGATGGGATTCCACAGCTTATTTTTGTTCGATCCAGCTATACTATTGAGACTGTTGAAGCAGAACGGATATCAGTTGATCATGTTGCTCATCTCAAGCCATCTGATGGTGGTTCAGCAGCTACGCAATTGGCTGCTCACCTTACTGGTATACACAGTGCCATCAAAATGCTTCATAGCAGAATTAAGGTGCTACATCACTATCTTCTTGCAATGCAGAAAGGTGATTTTCCATGTGAAAATTCACTGTTAAGACAAGTGTCAAGTCTCCTGAGAAGATTGCCTGCCATTGAATCTGGAAAATTTCAAGATGATTTCTTAATGGAATACAATGATACCTTATTGATTACTTACCTTGCCATGCTGACCAACTGCTCAAGTGCAATGAATGAACTTGTGGACAAATTCAATACTGCGTACGATAGGCATAGCAGAAGGGGTGGACGAACTGCTTTTATGTGA 936 0.4573 MASSSSSGLTFKVHPLVIVNISDHYTRIKCQMNPPNSNNPNKDSNNSGAPRVYGCVIGVQKGRTVEIFNSFELLHDPSTQTLDRAFLEKKQELYKKVFPHFYILGWYSTGTHALESDMHIHKALMDINESPVFVLLNPSINHSQKDLPVTIYESELHVIDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKGDFPCENSLLRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLITYLAMLTNCSSAMNELVDKFNTAYDRHSRRGGRTAFM* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2775 311 SMART pad1_6 10 157 IPR000555 GO:0005515|GO:0008233|GO:0008237
Dod02g2775 311 CDD MPN_CSN6 9 307 IPR033859 GO:0000338|GO:0008180
Dod02g2775 311 Pfam Maintenance of mitochondrial structure and function 178 292 IPR024969 -
Dod02g2775 311 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 7 130 IPR000555 GO:0005515|GO:0008233|GO:0008237
Dod02g2775 311 PANTHER COP9 SIGNALOSOME COMPLEX SUBUNIT 6A 2 311 - -
Dod02g2775 311 Gene3D Cytidine Deaminase, domain 2 1 192 - -
Dod02g2775 311 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 2 311 - -
Dod02g2775 311 ProSiteProfiles MPN domain profile. 11 158 IPR037518 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2775 2 262 Eukaryotic Initiation Factors Gene Family AT2G39990 23.684 2.98e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2775 K12179 - gmx:100797079 550.821