Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2761 ATGACAACAACTGCACAAGGTGGTTCAACCAATTGGTCTCAGCATCAGCAGCAGCAACAGAGTGAGAGAGCAGATGGGAAATCCTCAGATACTGCGACTTCTGCCAACAACACCTATCCAGCGCCAACAGCTCTGTACGAGGACCTTGCTCGTGATGCCAACCTCTTCCGCCAAAAGCTTGAATCTTTTCATCAATCTTTTGGCACCAAATTCAAGGTTCCTACTATAGGAGGAAAGCCACTGGATCTATATCGCCTTTTCATGGAAGTAACAACTCGTGGTGGTATCGAAAAGGTAATTGTCGATCGCAAATGGAAGGATGTGATTCTGGGCTTCAAGTTCCGAGATACCATAACAAGTGCCTCATTTATGGTGCGCAGATACTATCTCTCGCTGCTTTATCACTTTGAGCAAGTGTATTACTTTCGGAAGCAAGTCCCTCCTTCCTTGACAACTGGATTTTCTTTGTTACATGCAGCTAGTCCAGTACAGCAGCTTGGTTCTGTGGTTCCTGGAACAATTGATGGGAAATTTGATGGTGGATATGTAGTTACAGTAAATCTGGGTTCTGAACAGGTGAAAGGCATTCTGTATCATGTTCCTAGCAATGTGTCCCAAAGTTCTAATACTCAAGGTGTCCCAATTTCCCGGAATCGAAAGAAGTCTAAGTTGGCATTACGTGATCCATCTCGGCCAAAGTCAAACAGGAGCGGTTACAATTTCTTCTTTGCTGAGAATTATGCCAGATTAAAGCCCTCATTCTCCGGGCAAGAGAGAGCAATCAGTAAGAGGATTGGGTTTCTGTGGAGCAATCTGACAGAAGCAGAGAGACAGGTTTACCAGGAGAAAGGGCTGAGAGATAAGGAAAGATACAAGACTGAAATGTTGGAGTACAAATCCAATAATTCAACTCCTCAGTAG 921 0.443 MTTTAQGGSTNWSQHQQQQQSERADGKSSDTATSANNTYPAPTALYEDLARDANLFRQKLESFHQSFGTKFKVPTIGGKPLDLYRLFMEVTTRGGIEKVIVDRKWKDVILGFKFRDTITSASFMVRRYYLSLLYHFEQVYYFRKQVPPSLTTGFSLLHAASPVQQLGSVVPGTIDGKFDGGYVVTVNLGSEQVKGILYHVPSNVSQSSNTQGVPISRNRKKSKLALRDPSRPKSNRSGYNFFFAENYARLKPSFSGQERAISKRIGFLWSNLTEAERQVYQEKGLRDKERYKTEMLEYKSNNSTPQ* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2761 306 MobiDBLite consensus disorder prediction 1 40 - -
Dod02g2761 306 PANTHER HIGH MOBILITY GROUP B PROTEIN 10-RELATED 18 305 - -
Dod02g2761 306 SMART ARID_2 47 137 - -
Dod02g2761 306 SMART hmgende2 231 300 IPR009071 -
Dod02g2761 306 CDD ARID_HMGB9-like 52 137 IPR045303 GO:0003677
Dod02g2761 306 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 232 299 IPR009071 -
Dod02g2761 306 MobiDBLite consensus disorder prediction 204 233 - -
Dod02g2761 306 SUPERFAMILY ARID-like 48 148 IPR036431 GO:0003677
Dod02g2761 306 SMART bright_3 51 142 IPR001606 GO:0003677
Dod02g2761 306 Pfam ARID/BRIGHT DNA binding domain 55 137 IPR001606 GO:0003677
Dod02g2761 306 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 18 305 - -
Dod02g2761 306 Gene3D High mobility group box domain 215 306 IPR036910 -
Dod02g2761 306 SUPERFAMILY HMG-box 220 301 IPR036910 -
Dod02g2761 306 ProSiteProfiles ARID domain profile. 50 141 IPR001606 GO:0003677
Dod02g2761 306 CDD HMGB-UBF_HMG-box 232 295 - -
Dod02g2761 306 Pfam HMG (high mobility group) box 232 299 IPR009071 -
Dod02g2761 306 Gene3D - 42 151 IPR036431 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2761 Dod-Chr2 59808266 59810913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2761 9 304 ARID Transcription Factor Family AT3G13350 50.962 2.90e-103 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Dod02g2761 ARID 1.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2761 - - adu:107491521 463.381