Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2755 ATGTCGATGGTGCTGAGGAAGGTGTGGGAACTGGTCTCCAATTCGGGATCGAGCTCCGATACCAGCTCAGCACAGCTGGCACATTCGTCTTCTTCTTCTTCTTCTTGTTCGGATTTGGGTGCGTTGGAGCAGCTCCCAGGTGACATATTATTGCAAATCTTGAGGTTGTTGGGTCCAAAGGATGCTGCAAAATTGAGCTCCGTTTGCAAGGCTCTCAGATCCTTGGTTTCGGATAACCGCTTGTGGGTCTACTTCCTTCAGACCCACCAGGCTGACCCATCATGGGATTCCGTCTTCTTTGCTGAGACTAGTTTGAGCTACGGCTACCCTCTTCCGCTGCAGCTGTCGTTCAAGCATATTTATGGCCAACGAGCACGAGTGCCTGGTTCTGTTATCATCGATGGCGGTTCTGGCTATTGCAAATTTGGTTGGAGCAAATATGTGTGTCCGTCTGGGCGATCAGCAACCTTCTTGGAATTTGGTAACATTGAGTCGCCAATGTATAGTAGACTTCGACACTTTTTTGCGACTATATATAACAGGATGCAGGTGAAACCAAATTCACAACCAGTTATTGTTTCTGTACCAATATGCCATTATGATGATACTGAATCAGCCAGAGCATCTAGGCGGCAGCTTAAAGAAGCAATCTATTCTGCCTTGTTTGATTTGAATGTTCCTGCTGTTTGTGCTGTAAACCAGGCAACTCTAGCTCTGTTTGCTGCGAAACGAGCTTCTGGAATAGCTGTCAATATAGGTTTCCAAGTCACATCTGTAGTTCCAATTTTTAATGGTAAAGTGATGCGCAAGGTGGGTGTGGAAGTTGTGGGAATAGGAGCACTAAAACTAACAGGATTTCTTAGGGAGAAGATGGAACTTAACAACCTAAATTTTCAATCTTTGTACACTGTTCGCACATTGAAGGAGAAGCTGTGCTATGTTGCTCTTGATTATGAAGCTGAGCTATCAAAAAATACAGAAGCATCATTTGAAGCTGTAGGAGAAGGGTGGTTTACACTTTCAAAAGAGCGGTTTCAAACAGCAGAGATCTTGTTCAAGCCACATCTTGCTGGAGTGCAAACAATGGGTTTGCACCAGGCCATAGCTCTTTGTATGGAGCATTGCCATTCTGAAGAATTAGCAGGCGACAGTGACTGGTACAAGACTGTAGTTTTATCAGGCGGGTCTTCATGTTTACCAGGTTTGGCAGAAAGGTTAGAAAAGGAACTCCATGGCTTACTTCCTCCGTACATGTCCAATGGAATTCGGGTCATACCTCCTCCATATGGTGCTGATACTCCTTGGTTTGGAGCAAAGATTATTGGCAATCTGAGCACTTTTCCTGGTCCCTGGTGTGTGACCAAAAAGCAGTTCCGACAGAAGTCTAGGCTCCTCAACCGCATATGGTGA 1410 0.4532 MSMVLRKVWELVSNSGSSSDTSSAQLAHSSSSSSSCSDLGALEQLPGDILLQILRLLGPKDAAKLSSVCKALRSLVSDNRLWVYFLQTHQADPSWDSVFFAETSLSYGYPLPLQLSFKHIYGQRARVPGSVIIDGGSGYCKFGWSKYVCPSGRSATFLEFGNIESPMYSRLRHFFATIYNRMQVKPNSQPVIVSVPICHYDDTESARASRRQLKEAIYSALFDLNVPAVCAVNQATLALFAAKRASGIAVNIGFQVTSVVPIFNGKVMRKVGVEVVGIGALKLTGFLREKMELNNLNFQSLYTVRTLKEKLCYVALDYEAELSKNTEASFEAVGEGWFTLSKERFQTAEILFKPHLAGVQTMGLHQAIALCMEHCHSEELAGDSDWYKTVVLSGGSSCLPGLAERLEKELHGLLPPYMSNGIRVIPPPYGADTPWFGAKIIGNLSTFPGPWCVTKKQFRQKSRLLNRIW* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2755 469 SMART actin_3 128 469 IPR004000 -
Dod02g2755 469 Gene3D - 171 460 - -
Dod02g2755 469 ProSiteProfiles F-box domain profile. 39 85 IPR001810 GO:0005515
Dod02g2755 469 Pfam Actin 177 459 IPR004000 -
Dod02g2755 469 Gene3D Actin; Chain A, domain 4 278 361 - -
Dod02g2755 469 Pfam F-box-like 43 82 IPR001810 GO:0005515
Dod02g2755 469 SUPERFAMILY Actin-like ATPase domain 244 459 IPR043129 -
Dod02g2755 469 SUPERFAMILY Actin-like ATPase domain 130 250 IPR043129 -
Dod02g2755 469 Gene3D - 24 109 - -
Dod02g2755 469 Gene3D - 235 433 - -
Dod02g2755 469 PANTHER ACTIN 83 461 IPR004000 -
Dod02g2755 469 CDD NBD_sugar-kinase_HSP70_actin 131 275 - -
Dod02g2755 469 PANTHER MACRONUCLEAR ACTIN 83 461 - -
Dod02g2755 469 SUPERFAMILY F-box domain 29 125 IPR036047 GO:0005515
Dod02g2755 469 SMART fbox_2 45 85 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2755 Dod-Chr2 59765714 59771817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2755 177 460 Cytoskeleton Gene Families AT3G12110 30.717 4.26e-40 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2755 K16616 - gmx:100791973 788.489