Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2743 ATGGAATCCCAGTTAGTTGGTGGAAACAGTATAATGGAAGTCTCAGGGGATGTTGGTTTCAGTTCATATGAAGTTCAGATGCATCAAGAAACATATGAAGTGTCTTCAGATGAGGGGTGTAGAGTGCTAGAGAATTCGTCTGGAGGTGAGTTGGGTGTCTGTGAAGACCATGCTTTTCAGGAACCATATGAAGGCATGGAATTTGAATCTGAAGATGCTGCTAAGATATTCTATGATGAATATGCGCGACGTGTAGGATTTGTCATGCGTGTGATGTCTTGTCGCCGCTCAGAAAGAGATGGTAGGATTCTTGCCCGCAGGCTTGGATGTAATAAGGAGGGTTACTGTGTCAGCATCCGAGGGAAATATGGACCAATTCGTAAGCCAAGGGCCAGCACAAGGGAAGGTTGTAAGGCAATGATCCATGTCAAGTATGATAAGTCTGGAAAATGGGTGATAACAAAGTTTGTGAGGGATCATAATCACCCGCTAGTAGTCTCTTCACGTGAAGTGCGTCAAACAATGGATGAGAAGGACAAGAAAATTCAGGAGCTAACCGCAGAGCTTCGGAATAAAAAACGGTTGTGTGCAATATATCAAGAACAGTTAACTTCCTTTATGAAAATTGTTGAAGAGCACAGCGACAAGCTGTCTATGAAAATTAGTCATGTAGTTAATAATATTAAAGAATTTGAAAACACAGAAGAGCTTTTGCGCAAGTCGTAG 726 0.4201 MESQLVGGNSIMEVSGDVGFSSYEVQMHQETYEVSSDEGCRVLENSSGGELGVCEDHAFQEPYEGMEFESEDAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKYGPIRKPRASTREGCKAMIHVKYDKSGKWVITKFVRDHNHPLVVSSREVRQTMDEKDKKIQELTAELRNKKRLCAIYQEQLTSFMKIVEEHSDKLSMKISHVVNNIKEFENTEELLRKS* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2743 241 Coils Coil 168 202 - -
Dod02g2743 241 Pfam FAR1 DNA-binding domain 77 165 IPR004330 -
Dod02g2743 241 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 29 239 - -
Dod02g2743 241 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 29 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2743 Dod-Chr2 59690118 59695450 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Dod02g2743 FAR1 1.6e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2743 - - gmx:100787741 424.091