Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2712 ATGGCATACTATAATTCTATAGTTGAGACGCAACATGGATCCATTACTGCCACTTTCACTTGGGACACCAACAAGATTCTCTTCTTTATGGGATTTGGATTCCTTTTCTCAGAAATAGTAGGATCACCCACCAATGATACACTTTTCATTTCCAAACACTCTTTATTTAAGGCTGAGGGAAAGACTTATCCTAATATAAAATTGAGGCCGCCTGGGGCTCACAGGTCAGTGTGCACTGTGCTGGGATTGGAAGAGGGGAAAGGGTGTGTCATTGTTGGAACCCTCTATAAGCACATGAGGCTCAAACCTTGCATACTTGATGAGTATTCTAAGGAGGATGAAAGTGGGAGAGTTAAGCTTGGCGGGGATCTCATTTCATCTCCTGTGGGAAGACAAATATGTTGTTCTTGTGCTGGGTTAAGTGTAGAGAGCTGTAATAATCTTCAGTCTCAGCTTCTCATTGATCACATTACTGGGCATTTAGGAGATGAGAAGGAGCAAAGTATGGCATCTCAAATTGTTCATGTGGTCATTGCTGGAAATTCTGTTGAGATGCCACGTGGAATTCTTAATGGACAGAAGTTGGCTTCAAAGGATCTCTCAGGTGTAGCTGAACCAATAAAGGAACTGGATATCAGGTTCATTTCATTGATTGCCGCTGGTTTGCCTTTGGATATAATGCCAGGACCCAATGACCCTGCTAACTTCTCATTACCACGGCAGCCTTTGAATAGATGCCTTTTTCCCGAGTCAACAGCTTATAAAACCTTTAGATCTTGTACAAATCCTCATTTTTTTGAGATTGATAATATCAGGTTTCTTAGGACATCAGGACAGAACATAGATGATCTTGAGAAGTATTCTGAGGCAAAAGATAAACTTGAATTCATGGAAAGGACGCTAAGGTGGAGCCATTTCGCACCCACGGCACCTGATACTAGTATGCACTATATGTACTTCAGTTTGTCAGCAATATCGTGTTTCTCTTTTGAAACAGTAGAAGATTTAGTTGACCCCTATGTGGTTGCTACTGATGCACTTTTGGGGTCAACCTCTTGTATGATGAAATTGTTGACGAGCAATATCGGTGAGCTGAAAGACTATAGCGGTCCACAAGAAACTTGTCTTCAGAAACAAAACAGTATGAAACTATCACTGTTCCCTTACCTCCTCGGAAAAACAGAGTTTGTAAGCTTTATTATTCTGAAGATAGGAAGGTTGAAGCTTTTGATTATTCAGAGCATGGAGAACAAGATGATCAACAAAGATGATTCCTTTTCCGCAAAGGGTGTCCCAGTCCATAGTCAGGTTCGGAAGATAAAGCAAGAATCGGAGAAGATTGATGATTGGACACCGCGGCAGCCAGAGATGAGGCCTGTTCTTCTGAGGGAGTTAAGCCGGCAGATTTCCCGGTCGCCGTTGGGAATTTCCGGCCAACCGATTTCGGTTGGTGACTCATAG 1461 0.4244 MAYYNSIVETQHGSITATFTWDTNKILFFMGFGFLFSEIVGSPTNDTLFISKHSLFKAEGKTYPNIKLRPPGAHRSVCTVLGLEEGKGCVIVGTLYKHMRLKPCILDEYSKEDESGRVKLGGDLISSPVGRQICCSCAGLSVESCNNLQSQLLIDHITGHLGDEKEQSMASQIVHVVIAGNSVEMPRGILNGQKLASKDLSGVAEPIKELDIRFISLIAAGLPLDIMPGPNDPANFSLPRQPLNRCLFPESTAYKTFRSCTNPHFFEIDNIRFLRTSGQNIDDLEKYSEAKDKLEFMERTLRWSHFAPTAPDTSMHYMYFSLSAISCFSFETVEDLVDPYVVATDALLGSTSCMMKLLTSNIGELKDYSGPQETCLQKQNSMKLSLFPYLLGKTEFVSFIILKIGRLKLLIIQSMENKMINKDDSFSAKGVPVHSQVRKIKQESEKIDDWTPRQPEMRPVLLRELSRQISRSPLGISGQPISVGDS* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2712 486 Pfam DNA polymerase delta subunit OB-fold domain 74 115 IPR040663 -
Dod02g2712 486 Gene3D - 125 337 - -
Dod02g2712 486 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 73 117 IPR024826 -
Dod02g2712 486 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 137 317 IPR024826 -
Dod02g2712 486 Pfam DNA polymerase alpha/epsilon subunit B 146 325 IPR007185 GO:0003677|GO:0006260
Dod02g2712 486 Gene3D - 54 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2712 Dod-Chr2 59279497 59305796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2712 73 344 Core DNA Replication Machinery Family AT2G42120 52.083 1.03e-105 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2712 K02328 - vvi:100241865 338.961