Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2684 ATGGAAGGAGGAATATCATCCCCATCTTCATCATCAAACTCACTCTATAGAGAGTGCTTAAGGAACCATGCAGCCAGCCTTGGCAGCTACGCCACAGACGGCTGCGGTGAGTTCACCCCCGACGATATGTCGCCGGGAGATGGACTTCATTGTGCAGCTTGTGGCTGCCACCGCAACTTTCACCGCAAAGTAACGTACCCTCCTGGAATAAGGGACAATACTCCGGAGGGTACCATCATCACGACCCATGAGCTCATGGACTATTCGGAAGGAAGGGCGGCAGTGGCGGAGGCGGAGGAAGGAGAGTTCAGGACAGGGAACAATAAGAAGAGGTTCAGGACTAAGTTCAGTGAGGAGCAAAAGGAGAAGATGTTAGGGTTTGCTGAGAAAATTGGGTGGAAGCTGCAGAGGATTAGTAAAGAGGTTGATGATGAGGTTGAGAGGTTCTGCAGGAGTGTTGGGGTGAGTAGGCAGGTTTTCAAGGTTTGGATGCATAACCATAAGAACTCTTCATCTTCAAATGGCAATGCCTCCTCTCTCACTCAGTAG 549 0.5046 MEGGISSPSSSSNSLYRECLRNHAASLGSYATDGCGEFTPDDMSPGDGLHCAACGCHRNFHRKVTYPPGIRDNTPEGTIITTHELMDYSEGRAAVAEAEEGEFRTGNNKKRFRTKFSEEQKEKMLGFAEKIGWKLQRISKEVDDEVERFCRSVGVSRQVFKVWMHNHKNSSSSNGNASSLTQ* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2684 182 Gene3D - 94 175 - -
Dod02g2684 182 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 16 64 IPR006456 -
Dod02g2684 182 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 16 63 IPR006456 -
Dod02g2684 182 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 11 173 - -
Dod02g2684 182 Pfam ZF-HD protein dimerisation region 15 65 IPR006456 -
Dod02g2684 182 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 11 11 173 - -
Dod02g2684 182 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 109 169 IPR006455 -
Dod02g2684 182 SUPERFAMILY Homeodomain-like 103 169 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2684 Dod-Chr2 58911727 58912412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2684 16 170 ZF-HD Transcription Factor Family AT4G24660 46.471 1.04e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Dod02g2684 ZF-HD_dimer 4.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2684 - - adu:107490538 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3216 04 55767310 55768190 Dod02g2684 02 58911727 58912412 PCT