Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2683 ATGGATGGGGATAATGGTCTTAACATACGCAACTGGGGTTACTATGAACCTGCTACCTCCTTCAAGAGCCATCTGGGGCTCCAGCTAATGTCGTCGATGCCGGAAAAGCCTTTGGTTGGAGGGCGCAATGCCGCGGTGTTGTCTGGCGCTAATGGGGCTTATCACCATAGGGACATTGGGATGCCCCAAGCTTCATACCCAATGGAATACATGAGGGATGCTTGGGTGAGTAGTCAGAGGGAGAAGTATATGAATATGATACCTACAAACCCGAGTTATGGTGGTATTCCAGAGACTTCTTCAGCACATCATATGCAAATGATTCCGCCACCCGAGGTGTTGAAGGAAGAAAGGCCAGTGGAAGAGGCACCTGTTGTTGAGAAGGCAAATGGCACTGGTAAGAAGAGGCAGGGGCCAAAGGTTCCGAAATCCCCCAAGGCGAAAAAGCCCAAGAGGGGGCCTCGTGCGCCAAAGAATGAGAACGCTCCTTCAGTTCAACGAGCAAGGGTTCCGAAGAAAACTACTGAAATCGTGATAAATGGGATTGATATGGATATTTCCAGCATTCCAATTCCTGTTTGTTCATGCACCGGGACAGCTCAACAGTGTTACAGATGGGGCTCTGGTGGGTGGCAGTCTGCATGTTGCACTACGGGCATGTCTATGTATCCTTTGCCTATGAGTACTAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTAGAGAAACTTGCGGCTGAGGGATATAACTTTGCTAGTCCGATTGATTTGAGGACTTATTGGGCAAAGCATGGCACCAATAAGTTTGTCACAATCAGGTAG 849 0.4841 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLVGGRNAAVLSGANGAYHHRDIGMPQASYPMEYMRDAWVSSQREKYMNMIPTNPSYGGIPETSSAHHMQMIPPPEVLKEERPVEEAPVVEKANGTGKKRQGPKVPKSPKAKKPKRGPRAPKNENAPSVQRARVPKKTTEIVINGIDMDISSIPIPVCSCTGTAQQCYRWGSGGWQSACCTTGMSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFASPIDLRTYWAKHGTNKFVTIR* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2683 282 MobiDBLite consensus disorder prediction 113 172 - -
Dod02g2683 282 Pfam GAGA binding protein-like family 1 282 IPR010409 -
Dod02g2683 282 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 282 - -
Dod02g2683 282 MobiDBLite consensus disorder prediction 139 153 - -
Dod02g2683 282 SMART GAGA_bind_2 1 282 IPR010409 -
Dod02g2683 282 PANTHER - 1 282 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2683 Dod-Chr2 58894127 58895651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2683 1 282 BBR or BPC Transcription factor family AT2G01930 51.342 1.01e-95 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Dod02g2683 GAGA_bind 5.9e-109 No_clan