Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2672 ATGGCAGACTCAAGTTCAGTTGATGTGATTTTGGAGTTTCTGAGGAGGAATCGGTTCATGCGAGCTGAGGCAGCTCTTCGCAGCGAGCTCAATAATCATTCTGATGTGAATGGGTTTCTTCAGAAGCTTAAATTGGAAGAGAAAGAATTGTGTGATGTGTCTCATGAAGATGAGAGGAAGCCGGTGATAGAAGACCGAGGGTCGGATTCTCGTGATAGTGTTGATGCTTCTAAAGAACTCATTGTTAAAGAAATAGAGTGTGGGACTGATAGAAATGCTACCGAAAGCAAATGGAAAGCCACTACTTCTACTGGGGAACGGAATAAATCTAATGAAGTGGGTGGGACAAGTGACAAAAGCTTCATTTTCTCAAAGAGTTCGGAGGAGGAAAATGTGCTTGATTTGAACTCGTGGAAGTTTAACCCCAGCAATGGTCCTGCAGAGCCTTACCGGAGTTATGGTGGAAGCGGGGCTAACAATACTTTGAAGACCCTGGTACCTCAGCAATCAAAATATCAAATGAGTGGAGCTCTTGATGCAGCCAACAGAAATGCAAAATCTGGGGAGGAAAATACTGTGCCTGCTGAGAACAAGCCCTTATGGCTTGGAAGTAGTAGTAAAGTCTCTATGGAACTGAAGTATGACCTTACGCAAAGCAAAGAACCTAGGGAACTTGATCGACAGCTTAAATTCAGCGGTTCTTCACTTAAAGAGAACTTGGGAGATAATGCCTTGTCAAGAAATAATGAGAATGTGAACTCATCTTCAGATCTGTGGAAGGATTGTTCTGTTAAGACTGTTTTCCCATTCACAAAGGGGGATGTGTCTACGAGCTATAATGGTTCAACTTATTTAAGCAGAAAAGAGGAAAAGAAAAGGGAAGAAGTAACTGATGTTAGGGCAGCAATAAAAGAGCAAGTGGATGAAGTGGGGAGGGCTTTATTCTTAGGAAAGTTGCAAGGCAGTTCTGAACAGAAGAACATTGGCAGCTTAAGTTATCCTCTCGTGCCAGAGAACCAGAAGGAAGAGTTTCCTAGACTTCCTCCGGTTAAAATCAAGTCAGAAGATAAGCCATTGGCTATTAATTGGGAGGAGAAGTTCGAGCGTGATGGACCTGCCGCAAAACATGGTGGTGCTGACAACACTTTACTAATTGGGTCATATTTGGATGTGCCTATTGGACAAGAAATTAAAACTGGAGGTATGAGGAGGCCTGCAGGGGGCAGTTGGCTGTCTGTCAGTCAAGGGATTGTAGAGGATACATCTGATCTTGTATCTGGTTTTGCAACAGTTGGTGATGGGTTGAGTGAATCTATTGACTATCCAAATGAATATTGGGACTCTGATGAATATGATGATGATGATGATGTGGGGTACATGAGACAACCAATCGAGGATGAGGCCTGGTTTTTGGCACATGAAATCGATTACCCTAGCGACAATGAAAAGGGGACTGGGCATGGAAGTGTTCCAGATCCTCAGGAGAGAGGTACAGCCAAAGATGATGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTCTCTGGAGAGCAATATCTTCAAGCAAAGAATGCTGAGGCAGTCACAGTTTCGAATGATCCTATTGGCCTTACAGTTACTGAAATGTATGGAGGGACTAATGATAATAATTTAATGGGTCAATACAATGGACAACTGATCGATGATGAAGATCTGACTCTGATGCGTGTAGAACCTGTCTGGCAGGGCTTTGTCACCCAGACAAATGATCTCACCATGCTAGGAAATGGGAAGGTTCTGAATGATAGTGGAAGATCACGACTTGAGGATATTGGTATGGAAGATAATCAGCACGGTTCAGTTAGGTCAATTGGGGTGGGGATTAACAGTGATGCTGCTGATATTGGCAGTGAAGTGCATGGAAGTTTGATTGGGGGTAGTAGTGAAGGAGATTTTGAATATTTCTGTGATCGTGATGTTGGGATTGGTGGCTCCAAACACTCTCATCATGAGTTGGATAACAATTCAATTAACAAGTCATTCAAAAATAATAAGAAAAGTGACAAGAGCGAGTCAAATAAATATGTCATTGGGGGTGATAAAGATGCATGCTTGCAGGTAAAAATGCATAATGACGTGAACTTCTCATTCCCCCAAACTTTAAATGATGGCCAGATGATTCAGGCTGGCTCCAGTAAGACCTCATGGTCAAATAGCTGTAACGTAGATGAAAGGGACGACCATCCCAATGCATTTGTGGAATCTGATGACATGCTTTCTTCTTGGAGGCGGAAGAGCAGTGATTCCTCACCAGTTAAAAGTTCTAGGGATGAGAATAATGCAAACATGGCAAGATCGACAAACTCTTCTCCAACTACAGTCTCAAATTATGGGTATAATGAAACAGGGCATGTCAAGCTAGAAGAGGATGAAAAGGTTGGCACTGAAAGGGAAGATGATCTAGGTGTGTCACTAGACGATGAAGAGGCGGCTGCTGTACAAGAGCAGGTAAGGCAAATTAAGGTGCAGGAGGAGGAATTTGAAACCTTCAATCTGAAGATTGTGCACCGGAAAAACAGAACTGGCTTTGAGGAGGACAAACACTTCCATGTTGTTTTAAATTCTGTAATAGCTGGGCGTTATCATGTTACTGAGTATCTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGACCTGCACACAGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAGGACTTCTTTGACCAAAGCCTTGATGAGATCAAGCTTCTCAAGTATGTCAATAAGCATGATCCTGGAGACAAGTATCACATTCTGCGATTATATGATTATTTCTATTATAGGGAACATTTGTTAATAGTATGCGAACTACTTAAAGCCAACTTATATGAGTTTCATAAATTTAATAGAGAATCAGGGGGTGAAGTGTACTTCACAATGCCTAGATTGCAGTCAATTACCATTCAGTGTTTGGAAGCACTTCAGTTTTTACATAGCCTTGGACTAATACACTGCGATCTAAAGCCAGAGAACATTTTGGTTAAAAGCTATAGCAGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAGACGGATCACCTTTGCTCATATGTTCAGTCCAGGTCCTATCGAGCTCCTGAGGTTATTTTGGGGCTTTCATATGACAAGAAGATTGATATCTGGTCACTTGGATGCATCTTGGCAGAACTATGTACTGGCAATGTCCTCTTCCAAAATGATTCCCCTGCAACGTTACTTGCTAGGGTGATTGGGATAATTGGTCCAATCGATCAAAGTATGCTTGCAAAAGGGCGGGATACATACAAGTACTTCACCAAAAATCATATGCTTTACGAACGGAATCAGGAAAGTAACAAGTTGGAATACCTGATTCCGAAAAAGACATCATTGAGGCATAGATTGCCAATGGGGGATCAAGGCTTCATTGACTTTGTTGCGCATTTGCTCGAGATTAACCCAAAGAAGCGGCCATCTGCATCGGAGGCCTTGAAGCACCCATGGTTATCATACCCTTATGAACCCATATCATCTTGA 3561 0.4209 MADSSSVDVILEFLRRNRFMRAEAALRSELNNHSDVNGFLQKLKLEEKELCDVSHEDERKPVIEDRGSDSRDSVDASKELIVKEIECGTDRNATESKWKATTSTGERNKSNEVGGTSDKSFIFSKSSEEENVLDLNSWKFNPSNGPAEPYRSYGGSGANNTLKTLVPQQSKYQMSGALDAANRNAKSGEENTVPAENKPLWLGSSSKVSMELKYDLTQSKEPRELDRQLKFSGSSLKENLGDNALSRNNENVNSSSDLWKDCSVKTVFPFTKGDVSTSYNGSTYLSRKEEKKREEVTDVRAAIKEQVDEVGRALFLGKLQGSSEQKNIGSLSYPLVPENQKEEFPRLPPVKIKSEDKPLAINWEEKFERDGPAAKHGGADNTLLIGSYLDVPIGQEIKTGGMRRPAGGSWLSVSQGIVEDTSDLVSGFATVGDGLSESIDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGTAKDDDDDQSFAEEDSYFSGEQYLQAKNAEAVTVSNDPIGLTVTEMYGGTNDNNLMGQYNGQLIDDEDLTLMRVEPVWQGFVTQTNDLTMLGNGKVLNDSGRSRLEDIGMEDNQHGSVRSIGVGINSDAADIGSEVHGSLIGGSSEGDFEYFCDRDVGIGGSKHSHHELDNNSINKSFKNNKKSDKSESNKYVIGGDKDACLQVKMHNDVNFSFPQTLNDGQMIQAGSSKTSWSNSCNVDERDDHPNAFVESDDMLSSWRRKSSDSSPVKSSRDENNANMARSTNSSPTTVSNYGYNETGHVKLEEDEKVGTEREDDLGVSLDDEEAAAVQEQVRQIKVQEEEFETFNLKIVHRKNRTGFEEDKHFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQSMLAKGRDTYKYFTKNHMLYERNQESNKLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASEALKHPWLSYPYEPISS* 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2672 1186 SMART serkin_6 875 1177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2672 1186 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 1184 - -
Dod02g2672 1186 PANTHER - 2 1184 - -
Dod02g2672 1186 Pfam Protein kinase domain 875 1177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2672 1186 ProSiteProfiles Protein kinase domain profile. 875 1177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2672 1186 Gene3D Transferase(Phosphotransferase) domain 1 929 1177 - -
Dod02g2672 1186 MobiDBLite consensus disorder prediction 734 757 - -
Dod02g2672 1186 MobiDBLite consensus disorder prediction 661 689 - -
Dod02g2672 1186 CDD PKc_DYRK_like 875 1177 - -
Dod02g2672 1186 MobiDBLite consensus disorder prediction 477 509 - -
Dod02g2672 1186 Gene3D Phosphorylase Kinase; domain 1 869 956 - -
Dod02g2672 1186 SUPERFAMILY Protein kinase-like (PK-like) 862 1179 IPR011009 -
Dod02g2672 1186 MobiDBLite consensus disorder prediction 55 75 - -
Dod02g2672 1186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1001 1013 IPR008271 GO:0004672|GO:0006468
Dod02g2672 1186 MobiDBLite consensus disorder prediction 723 812 - -
Dod02g2672 1186 MobiDBLite consensus disorder prediction 797 812 - -
Dod02g2672 1186 MobiDBLite consensus disorder prediction 94 119 - -
Dod02g2672 1186 MobiDBLite consensus disorder prediction 179 200 - -
Dod02g2672 1186 MobiDBLite consensus disorder prediction 92 119 - -
Dod02g2672 1186 MobiDBLite consensus disorder prediction 140 162 - -
Dod02g2672 1186 MobiDBLite consensus disorder prediction 758 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2672 Dod-Chr2 58685859 58695566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2672 874 1172 MAP Kinase Gene Family AT5G19010 31.034 6.04e-30 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Dod02g2672 Pkinase 2.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2672 - - gmx:100798608 1856.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3223 04 56038422 56045423 Dod02g2672 02 58685859 58695566 PCT