Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2670 ATGTGCAGTAGAGGACATTGGAGGCCAGCTGAGGATGAGAAGCTTAGGGAGTTGGTGGAACGCTATGGACCTCATAATTGGAACGCCATAGCTGAGAAGCTTCGAGGAAGATCAGGGAAAAGCTGCAGGTTGAGATGGTTCAATCAACTGGACCCAAGAATAAATAGAAGTCCTTTCACTCAGGAAGAAGAAGAGCGCCTTCTAGCTTCTCACCGGATTCATGGTAATAGATGGTCTGTGATTGCAAGACATTTCCCTGGAAGAACTGATAACGCTGTCAAGAATCATTGGCATGTGATGATGGCAAGGATTCGCCGAGAAAGGTCCAAGGTTTATGCAAAACGCCCTCCTCAATATCAGAGAACAATTTTTTCTCCAGACCTTGATGATGAGGATCATGACACAAAGTTTGACATGAAAAATGATATATCTTCTCTTGTTGAGAAGTATCATAAGAAGTATAGCTACCCTTGTGTCACATATGGCACTTTCCAATTTCCAAACAAGTTTCACTTGCAAGGTCCAAGTTCTTGTGCCACAATGCTACAAGAAAGAACTCAATCAATTGAGTTCTATGATTTCCTTCAAGTAAACACTGATTCGAACACTAAAAGTGAAGTGACAAACAATGCTAGACGAGATGATGAGGAAGTCAATCAAGATGTTGAGGGGCAGCAGAACAAGGACGGCATTCCATTCATTGATTTTTTGTCTACTCGGAGCTCCTAA 729 0.4225 MCSRGHWRPAEDEKLRELVERYGPHNWNAIAEKLRGRSGKSCRLRWFNQLDPRINRSPFTQEEEERLLASHRIHGNRWSVIARHFPGRTDNAVKNHWHVMMARIRRERSKVYAKRPPQYQRTIFSPDLDDEDHDTKFDMKNDISSLVEKYHKKYSYPCVTYGTFQFPNKFHLQGPSSCATMLQERTQSIEFYDFLQVNTDSNTKSEVTNNARRDDEEVNQDVEGQQNKDGIPFIDFLSTRSS* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2670 242 MobiDBLite consensus disorder prediction 203 230 - -
Dod02g2670 242 PANTHER MYB-RELATED PROTEIN A-LIKE 1 241 - -
Dod02g2670 242 Pfam Myb-like DNA-binding domain 7 67 - -
Dod02g2670 242 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 105 IPR017930 -
Dod02g2670 242 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Dod02g2670 242 SMART sant 55 103 IPR001005 -
Dod02g2670 242 SMART sant 3 52 IPR001005 -
Dod02g2670 242 Gene3D - 57 121 - -
Dod02g2670 242 MobiDBLite consensus disorder prediction 207 223 - -
Dod02g2670 242 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 54 IPR017930 -
Dod02g2670 242 CDD SANT 7 48 IPR001005 -
Dod02g2670 242 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Dod02g2670 242 PANTHER MYB PROTEIN-RELATED 1 241 - -
Dod02g2670 242 Gene3D - 4 55 - -
Dod02g2670 242 CDD SANT 58 101 IPR001005 -
Dod02g2670 242 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2670 Dod-Chr2 58655116 58657996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2670 1 242 MYB Transcription Factor Family AT1G17950 54.618 2.17e-83 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod02g2670 Myb_DNA-bind_6 4.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2670 K09422 - gmx:100811746 356.295