Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2660 ATGGCTGATTTTGAGAAAGATGAGATACCATTGCAGTCAGACACTCATCCCAAACCATCAAATGAACCTGTTGATTCTAAATGCCAGAGGCCAGTACCTAGGACACGAAGTGTATCAATTTCTATTCCTATGATCTCCATGGAGTCAAATGAACGAGAAAGTAATTTTATGGGACACACTGGTCCCCTGAGGAGTCAGCGAAAAACTCCATTTAATCAGATGAGTGGTCCATTATATGTTTCCCCTAAATCTGGAACCCTTTTCTGGAAGAATATAACAGCACCAGGGAACCAAGCAGGGGAAACTAAGACAGAAAAGTTTCCTTCGTTCCGAGGCACCAGTGAAAATGATATGCAGAACAACTATACTGGCATAAATGAACATTTAGTGAGGTCTGGTCCACTGGGAATGTGCAATGATCCGTACTGCACAACTTGCCCAACTTATTTCAAGGCTACTCAAGAAAGTAATTCAAAAGCTTCGGGTATATTCAATCCCAAGTTTCACAACTCCCTTTATGGGGATGCCAAGTGTTGGGCAAGAAGATTTTCTGCTTTCTTGATTCCGTATGTTCCTCGAGTTATGAATCCTCATACCAAACTTGTACAACAATGGAACAAGTTTTTCGTAACATGTTGCTTGTTGGCAATTTTTGTGGATCCATTGTTTTTCTTCTTGCTTTCCGTGCAGAAGGAACATAAATGTATTGTTCTAAACTCGACTATGACAACAGTGCTTGTTTTCCTGAGAAGCATGAATGATTTTGTATACTTCCTAAACATTATGCTTCAGTTTAGGCTGGCTTATGTGGCTCCTGAATCTAGGGTAGTTGGTGCCGGGGAGTTAGTTGACCATCCCAAGAAAATTGCACTGCACTACCTTCAAACATATTTTGTTGTCGACTTATTTGTTGTACTTCCACTTCCTCAGATAATCATATTGTTTGTCCTGCCACAAAACTTGGGGTCGTCAGGAGCAAACTATGCAAAGAATCTCTTGCGTTTCGTGATCCTTGTTCAGTATATTCCCAGATTATGTAGGGTTCTACCAATGCTCATTTCCCCAACTGGATTTGTATTTGAGTCAGCATGGGCGAATTTCTTTATAAATCTTCTATCCTTTATGCTATCTGGCCATGTTGTTGGATCATGCTGGTATCTCTTTGGTTTGCAGAGGGTTAACCAGTGTCTTCGAAATGCCTGCAAGAGCTCTCATATTGCTGGATGCAACAAGTTCATTGACTGTGGGAATCATGAAGATGCTGGATATCGATATGACACTAATTGGAATCGTTGGAAGAATGATACTAATTCGAATGCTTGTTTTACTGAAGATCATTTCCCTTATGGGATTTATCTTAAAGCCGTCAACCTTACTGCAGAACACAACGTGATCACTAGATATGTATATTCATCATTTTGGGGATTCCAGCAAATTAGTACTCTGGCTGGCAACTTAACCCCAAGCTATTTTGTGTGGGAAGTCCTCTTTACCATGGCCATCATAGGAATGGGACTCTTGCTTTTTGCTTTTCTCATCGGAAACATACAAAACTTTCTTCAGGCTCTTGGACGTAGGAGGCTAGAAATGTCACTTAGGCGACGTGATGTTGAGCAATGGATGAGTCATCGACGCTTAGATGAAGGTCTGAGAAGGAGAGTGCGACAGGCCGAACGTTATAGCTGGGCTGCAACCAGAGGGGTGAATGAAGAAATGCTTCTGGAGAATTTGCCGGAAGACCTCCAGAGGGACATCAGGCGTCATCTCTTTAAATTTGTCAACAAAAGATGGTGCCAGTTTTGTAGTTTAAATGCCATGCCGAAGGCACTGGCGTCGTGA 1839 0.4182 MADFEKDEIPLQSDTHPKPSNEPVDSKCQRPVPRTRSVSISIPMISMESNERESNFMGHTGPLRSQRKTPFNQMSGPLYVSPKSGTLFWKNITAPGNQAGETKTEKFPSFRGTSENDMQNNYTGINEHLVRSGPLGMCNDPYCTTCPTYFKATQESNSKASGIFNPKFHNSLYGDAKCWARRFSAFLIPYVPRVMNPHTKLVQQWNKFFVTCCLLAIFVDPLFFFLLSVQKEHKCIVLNSTMTTVLVFLRSMNDFVYFLNIMLQFRLAYVAPESRVVGAGELVDHPKKIALHYLQTYFVVDLFVVLPLPQIIILFVLPQNLGSSGANYAKNLLRFVILVQYIPRLCRVLPMLISPTGFVFESAWANFFINLLSFMLSGHVVGSCWYLFGLQRVNQCLRNACKSSHIAGCNKFIDCGNHEDAGYRYDTNWNRWKNDTNSNACFTEDHFPYGIYLKAVNLTAEHNVITRYVYSSFWGFQQISTLAGNLTPSYFVWEVLFTMAIIGMGLLLFAFLIGNIQNFLQALGRRRLEMSLRRRDVEQWMSHRRLDEGLRRRVRQAERYSWAATRGVNEEMLLENLPEDLQRDIRRHLFKFVNKRWCQFCSLNAMPKALAS* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2660 612 MobiDBLite consensus disorder prediction 94 116 - -
Dod02g2660 612 Pfam Ion transport protein 205 526 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod02g2660 612 MobiDBLite consensus disorder prediction 1 37 - -
Dod02g2660 612 Gene3D Helix hairpin bin 525 590 - -
Dod02g2660 612 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 595 - -
Dod02g2660 612 SUPERFAMILY cAMP-binding domain-like 526 596 IPR018490 -
Dod02g2660 612 Gene3D - 208 523 - -
Dod02g2660 612 SUPERFAMILY Voltage-gated potassium channels 197 527 - -
Dod02g2660 612 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2660 Dod-Chr2 58520468 58526762 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2660 5 595 Ion Channels AT3G17700 59.228 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2660 K05391 - gmx:100782506 915.605