Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2659 ATGGCTAGTTTCGAAAATGATGAGCTACCGATGCTGTCAGAAACAGATAAGCGACAATACGATGAGCCCTTGAATTCTAAATTACAAAGATTTTTATCCAGGACACAAAGTGCAATATCTATTCCTGTGAGCTCCCTGGAGTCATATCAGAGAGAAAATAGTCTTGTTGGACATACTGGTCCACTTCGGAGCGAGAGGAAAACCCCCTTTGTGCAAATGAGTGGTCCACTATCTGGAACTGGAAATCTTTTACAGAAGAGTGTGGTTGCAACAGGAAACAAAGAAGAGGAAAGGAAGATGGACAATTTTGATACTTTCCACAGCACAGATTCGAGTCACTGGAATAACAACTATGATAGGAAAAATGAACACTTACTGAGGTCTGGGCAACTGGGAATGTGTAATGATCCTTATTGTACTACTTGCCCTACCTACTTCAAGGCTTCTCAACATAAAAATTCAAAAGCTTCAACTATATTTGATCCCAAGTTCCACAATGCTCTTTATGGGGATGCCAAGGGTTTTGCTAGAAAACTTGGCTCTTTCTGCTATTCATACATTCCTGGAGTTATAAATCCTCACTCTAAAATCGTACAACGATGGAGCAAGATTTTGGCCATTTTTTGCTTGGTTGCTATTTTTGTGGATCCATTATTCTTTTTTGTATTCCATGCACAGGAGCAGTATAATTGTATTGCGATAGACTGGCCGATGACAACAGGACTTGTTATAGTTAGAAGCTTGAATGATTTGGTATATTTCTTTAACATTCTTCTCCAGTATAGGTTGGCGTATGTTTCTCCTGAGTCAAGGGTGGTTGGTGCTGGTGATTTAGTTGATGATCCTAAGGAAATTGCTCTTCATTACTTTAAGGGTTATTTTTTAATGGACATGTTTGTCGTATTTCCTCTTCCTCAGATAATGATATTGTTTATCATGCCAAATTCCTTGGGGGGAGCAAATCAAGCCAAGAATCTTCTGCGTGCAACAATCCTAGTGCAGTATATTCCCAGGTTATTCAGGTTTCTGCCGCTCTTAATTGGCCAGTCTCCATCAGGATTCATATTTGAGTCAGCCTGGACAAATTTTATAATAAACCTTCTAATCTTTATTCTGTCTGGACATGTTGCTGGCTCTTGCTGGTATCTCTTTGGTCTACAGAGGGTTAACCAATGTTTGCGAAATGCCTGCGGTGACTCTCAGATTCCTGGATGCATGAAATTTATTGATTGTGGGCATGGTCTTGATGGAAACAATCAGCCTGGCCGAACATCAGATCAGTGGATCAACAACATTAATGCCACTGCCTGTTTGAATCCCCCTTCTGATGGTACTGGTTTTCCTTACGGGATCTATGAAAATGTTGTACAACTTACTACAGAAACCAACGTGGTCAATAAATACGTGTATTCTCTGTTTTGGGGATTCCAGCAAATCAGTACACTGGCTGGTAATCTAGTCCCTAGCACATTTGTGTGGGAAGTCCTTTTTACTATAGCCATTATAGCATCGGGACTCTTGCTTTTTGCAATTCTCATTGGAAACATCCAGAACTTTCTTCAGGCTCTTGGACGGAGGAGGCTAGAAATGCAACTCAGAGGCCGTGATGTTGAGCAATGGATGAGCCATCGACGCCTACCAGAAGATTTAAGAAGGAGAGTACGACATGCAGAACGGTATTCTTGGGCTGCAACAAGGGGTGTGAATGAAGAATTGCTTATGGAGGATTTACCGGAAGATCTCCAAAGAGACATAAGACGTCATCTTTTCAAATTTGTTAAGAAAGTTCGAATCTTTGCTCTGATGGATGAACCTATCTTAGATTCCATTTGTGAGAGACTAAGACAAAGGACATATATCAAAGGAAGTAAAATTTTGAGTCAGAGTTGTGTGGTAGATAAGATGGTATTTGTTGTGCGCGGCAAATTAGAGAGCATTGGAGAAGATAGAACTAGACTTCCCTTAGCTGAAGGGGATGCTTGTGGTGAAGAACTTCTAACATGGTATCTTGAACATTCTTCTGTCAGCACAGATGGCAGAAAGGTAAGGCTGCCAGGACAGAGGTTGATTAGCAACAGGACAGTAAGGTGCTTGACAAACGTGGAGGCATTTTCGCTCCGCGCTGCAGACCTTGAAGAAGTAACAATCCTTTTCACAAGATTCTTGCGGAGTCCACGCGTTCAAGGAGCACTAAGGTATGAGTCACCATATTGGAGATCCCTTGCAGCAATACGCATTCAAGTTGCATGGAGATACAGGAAGAAATGTCTATGTCGTGCTGATTCCTCAGGGTCAAATTATTGA 2304 0.4141 MASFENDELPMLSETDKRQYDEPLNSKLQRFLSRTQSAISIPVSSLESYQRENSLVGHTGPLRSERKTPFVQMSGPLSGTGNLLQKSVVATGNKEEERKMDNFDTFHSTDSSHWNNNYDRKNEHLLRSGQLGMCNDPYCTTCPTYFKASQHKNSKASTIFDPKFHNALYGDAKGFARKLGSFCYSYIPGVINPHSKIVQRWSKILAIFCLVAIFVDPLFFFVFHAQEQYNCIAIDWPMTTGLVIVRSLNDLVYFFNILLQYRLAYVSPESRVVGAGDLVDDPKEIALHYFKGYFLMDMFVVFPLPQIMILFIMPNSLGGANQAKNLLRATILVQYIPRLFRFLPLLIGQSPSGFIFESAWTNFIINLLIFILSGHVAGSCWYLFGLQRVNQCLRNACGDSQIPGCMKFIDCGHGLDGNNQPGRTSDQWINNINATACLNPPSDGTGFPYGIYENVVQLTTETNVVNKYVYSLFWGFQQISTLAGNLVPSTFVWEVLFTIAIIASGLLLFAILIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEDLRRRVRHAERYSWAATRGVNEELLMEDLPEDLQRDIRRHLFKFVKKVRIFALMDEPILDSICERLRQRTYIKGSKILSQSCVVDKMVFVVRGKLESIGEDRTRLPLAEGDACGEELLTWYLEHSSVSTDGRKVRLPGQRLISNRTVRCLTNVEAFSLRAADLEEVTILFTRFLRSPRVQGALRYESPYWRSLAAIRIQVAWRYRKKCLCRADSSGSNY* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2659 767 Gene3D Jelly Rolls 596 720 IPR014710 -
Dod02g2659 767 SUPERFAMILY cAMP-binding domain-like 526 715 IPR018490 -
Dod02g2659 767 MobiDBLite consensus disorder prediction 1 20 - -
Dod02g2659 767 Gene3D Helix hairpin bin 525 590 - -
Dod02g2659 767 Gene3D - 194 523 - -
Dod02g2659 767 CDD CAP_ED 598 714 IPR000595 -
Dod02g2659 767 SUPERFAMILY Voltage-gated potassium channels 193 526 - -
Dod02g2659 767 Pfam Ion transport protein 203 526 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod02g2659 767 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 763 - -
Dod02g2659 767 ProSiteProfiles cAMP/cGMP binding motif profile. 598 666 IPR000595 -
Dod02g2659 767 SMART cnmp_10 598 733 IPR000595 -
Dod02g2659 767 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2659 Dod-Chr2 58492939 58504496 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2659 1 676 Ion Channels AT3G17700 59.243 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2659 K05391 - gmx:100781973 1226.08