Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2658 ATGTCCAATTTTGAAAATGATAGGCTGCCGGTGCTGTTAGAAACAGATGAACAACAATATGGAGAACCCGTGGATTCTAAATTCCGAGGACTAGTATCCAGGACACCAAGTGCATCAATTTCTATTCCCATGAGCTCCCTGGAGTCATATCAGAGAGAAACCAGCCTTTTGGGACAAGGTGGTCCTCTTTGGAGTGCAAGGAAAACCCCCTTTATGCATATGAGTGATCTAGTTTATCCTACCCCTGGAACAGGAAATCTTTTTCAGCAGAGTGTAGTTGTCACAGGAAACAAAGCAGAGGACAGCAAGAGAGAAAATTTTGCTAAGTTCCGCGGAACAGGTTCAAATTGCTGGAATGACAACCATGATAGGAATAATGAGCACTTGCTGAGGTCTGGACAACTGGGAATGTGTAGTGGTCCTTATTGTACTACTTGCCCTACTTACTTCAAGGCTTCTCAGCTAAGAAACCCAAAAACTTCCTCTAAATTTGATCCCAAGTTCCGTAATTCTCTGTATGGGGATGCCAAAGGCTTTGCAAGAAAACTTTCTTCTTTCTGCTCTTCTTTTGTTCCTGGGGTTATGAACCCTCACTCTAAATTCGTACAATATTGGAACAAAATTATGGCCTTTGTTTGCTTCGCTGCTATATTTGTGGATCCATTATTTTTCTTCGTACTCTATGTGCAAAAGGACTATAATTGTATCGTTATCAACTGGAGAATGACAACAGTACTTGTTATAGTTAGAAGCTTGAATGATTTTGTATATCTCTTTAACATTCTTCTCCAGTTTAGGTTGGCTTATGTTTCTCCTGAGTCGAGGGTGGTTGGTACCGGACATTTAGTTGACCATCCAAAGAAGATTGCCCTTCATTACCTGCGGGGTTATTTTCTTCTTGACTTATTTGTTGTATTTCCTCTTCCTCAGATAATGTTATTGTTAGTCCTACCAAAATCCTTGAGGGGAGCAAATTATGCCAAGAATTATCTACGTGCAGCGATCCTAGTGCAGTATTTCCCCAGATTATTCAGGTTTCTGCCTCTGCTACTCGGCCAGACTCCAACAGGATTCATCTTTGAGTCGGCCTGGGCAAATTTCTTTATAAATCTTCTCATTTTTATGCTATGTAGCCATGTTGTTGGCTCTTGCTGGTACCTCTTTACTCTACAGAGGGTGAATCAATGTCTGAGAGAGGCCTGCAGTAATTCTAATATACCTGGATGCCTGAGATTCATTGATTGTGGACATGGCCATAATGGAAACAATGAGCCAGGCCTAACTTCGGCTCAGTGGAACAACAATTCAGATGCCATTGCTTGTTGGAGTCCGTCTCCCAGTGGTTTTACTTTTACTTATGGTCTCTATAACGATGCTGTAGGACTTACTGTACAAACTAACGTGGTGGATAAATACATTTATGCTCTGTTTTGGGGACTCCTGCAAACCAGTACTCTGGCTGGTAATCAAATGCCTAGCAATTTTATATGGGAAGTTCTTTTCACTATGGCCATCATAGGATTGGGACTCTTGCTTTTTGCGCTTCTCATTGGAAACATGCAAAACTTTCTACTATCTCTTGGACAGAGGAGGCAAGAAATGCATCTTAAACGCCGTGATGTTGAGCGATGGATGAGCCATCGACGGTTACCAGAAGATCTAAGAAGTAGAGTACGGGAGGCTGGACGGTATACTTGCGCTGCGACAAGGGGGGTGAATGAGGAAATGCTCATGGAGAATTTCCCAGAAGATCTGCAGGGGGACATAAGACGTCATCTCTTCAAATTTGTTAAGAAAACTCCGTTTGCCTGTCTAACTGAAGATGCCATAAAGAAGAGCCATCAATACTCTGATTTGCTTGATCCCATAATCAATTGCCTAGGCCTTTGTTGA 1893 0.421 MSNFENDRLPVLLETDEQQYGEPVDSKFRGLVSRTPSASISIPMSSLESYQRETSLLGQGGPLWSARKTPFMHMSDLVYPTPGTGNLFQQSVVVTGNKAEDSKRENFAKFRGTGSNCWNDNHDRNNEHLLRSGQLGMCSGPYCTTCPTYFKASQLRNPKTSSKFDPKFRNSLYGDAKGFARKLSSFCSSFVPGVMNPHSKFVQYWNKIMAFVCFAAIFVDPLFFFVLYVQKDYNCIVINWRMTTVLVIVRSLNDFVYLFNILLQFRLAYVSPESRVVGTGHLVDHPKKIALHYLRGYFLLDLFVVFPLPQIMLLLVLPKSLRGANYAKNYLRAAILVQYFPRLFRFLPLLLGQTPTGFIFESAWANFFINLLIFMLCSHVVGSCWYLFTLQRVNQCLREACSNSNIPGCLRFIDCGHGHNGNNEPGLTSAQWNNNSDAIACWSPSPSGFTFTYGLYNDAVGLTVQTNVVDKYIYALFWGLLQTSTLAGNQMPSNFIWEVLFTMAIIGLGLLLFALLIGNMQNFLLSLGQRRQEMHLKRRDVERWMSHRRLPEDLRSRVREAGRYTCAATRGVNEEMLMENFPEDLQGDIRRHLFKFVKKTPFACLTEDAIKKSHQYSDLLDPIINCLGLC* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2658 630 SUPERFAMILY Voltage-gated potassium channels 197 529 - -
Dod02g2658 630 Gene3D - 206 525 - -
Dod02g2658 630 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 5 607 - -
Dod02g2658 630 Pfam Ion transport protein 203 527 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod02g2658 630 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 5 607 - -
Dod02g2658 630 Gene3D Helix hairpin bin 529 594 - -
Dod02g2658 630 SUPERFAMILY cAMP-binding domain-like 529 601 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2658 Dod-Chr2 58479759 58488237 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2658 2 610 Ion Channels AT3G17700 54.472 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2658 K05391 - gmx:100795427 875.93