Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2655 ATGGCTAACTTTGAAAAAGACGAGGTGCCAATGCTGTCAGAATCATTTGCACAGCGATCTGATGAACCCGAGGATTCTAATTTCCGGAGGCTTGTATCAAGGACAAGAAGTGCATCAATGTCTATTCCCATGGTCCCCATGGAGCCATATGATAGAGAAGCTAGCCTTGTCGGGCATACTGGTCCACTTCGTACTGTGAGAAAGACCCCCTTTCCACAGATGAGTGGTCCACTATATGCTACCAATGGAACCGGAAATCCTTTGCAGCAGAGCATAGTTGTGAGAGGAAACAGAGTAGCAGAGAACAAGGCAGAAAACTTTTCTAATTTCCGTGGCACACGTGAAAATCATCAGAATAACTACTATGATAGGAAAAATGAACACTTATTGAGGTCTGGGCAACTGGGAATGTGTAATGATCCTTATTGTACTACTTGCCCTACATACTTCAAGGCTGCTCAGCAAGCAAATCCAAGAACTTCGTCTAGATTTGATCCCAAGCTCCATAATGTTCTTTATGGGGATGCCAAGGGTTTTGCTAGAAAAGTTTGCTCTTTCTGCTCTTCATGTGTTCCTGGAGTTATGAACCCTCACGCTAAAGTTGTACAACAATGGAACAAGATTTTGGCTATTTTTTGCTTGGTAGCAATTTTTGTGGATCCATTATATTTCTTCTTACTCTATGTGGAGAAGGATAATAAATGTATTATTATCAACTGGACTATGACAACAACACTTGTTTTATTTCGAAGCCTGAATGATCTAGTATATTTCTTGAACATTCTTCTCCAGTTCAGGTTGGCTTATGTTTCTCCTGAGTCAAGGGTGGTTGGTGCTGGAGATTTAGTTGACCATCCAAAGAAAATCGCCCTAAATTACTTCTGGGGTCATTTTTTTCTTGATTTATTCATTGTAATTCCTCTTCCTCAGATAATAATATTGTTTGTCCTCCCAAACTACCTGGGTTCATCAGGAGCAAATTATGCTAAGAATCTTCTGCGTGCAGCGATCCTTGCACAATATGTCCCCAGATTATACAGGTTTCTGCCTCTGCTGATTGGCCAGTCTCCTACAGGATTCATATTTGAGTCGGCTTGGGGAAATTTCATTATAAATCTTCTCATTTTTATGCTATCTGGGCATGTTGTTGGCTCTTTCTGGTACCTTTTTGGTCTACAGAGGGTTAATCAATGTTTGCGAGATGCCTGCCATAATTCTACTCTTACTGGATGCATGGATTTCATTGATTGTGGATATGGCCACACCCGTGTGCCAAGCGAGACAGCAAATCAGTGGAACAACAATGCAAACGCCACTGCATGTTTGGATTCCTCTTCTGGTATTTTTGAGTATGGGATCTATGCCAATGCTGTACCACTTACTATAAAAACTGACATGGTCAACAAATATGTGTATTCGCTGTTTTGGGGCTTCCAGCAAATCAGTACTCTTGCTGGTAATCAAACCCCCAGCTATTTTACATGGGAAGTCCTTTTCACAATGGCCATCATAGGGCTGGGACTCTTGCTTTTTGCACTCCTCATTGGAAACATACAAAACTTTCTTCAAGCTCTTGGACGGAGGAAACTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGCCATCGTCGCTTACCAGAAGATCTAAGAAGGAGAGTACGACAGGCTGAACGGTATAATTGGGCTGCAACAAGAGGTGTGAATGAAGAAATGCTAATGGAGAATATGCCAGAAGATCTCCAGAGGGACATAAGACGCCATCTATTCAAATTTATTAAGAAAGTTCGGATTTTTGCCTTGATGGATGAGCCTGTCTTAGATGCCATTTGTGAGAGACTAAGACAAAAAATATACATCAAAGGAAGTAGTATTTTGTTTCAGGGTGGTCTGGTAGAGAAGATGGTGTTTGTTGTACGTGGAAAACTGGAGAGCATTGGAGAAGATGGAACTAGAGTTAGCTTATCCGAAGGGGATGCTTGTGGTGAAGAACTTCTGAGGTGGTATCTTGAACATTCTTCAGTCAGCACAGATGGTAGAAAAATAAGGCTTCCTGGACAAAGGTTACCTAGCAGTTACAGGACAGTAAGCTGTTTAACAAACGTGGAGGCATTTTCACTGCGAGCTGCTGACCTTGAAGAATTAACAATCCTTTTCATGAGATTCTTGCGGAGTCCACGTGTTCAAGGAGCCCTAAGGTATGAATCATCTTATTGGAGATCCCTTGCAGCAACCCGCATTCAGGTTGCATGGAGATACAGGAAGAAACGACTCAATCGTGCTGCCTCAAAATCAGATTAG 2307 0.4196 MANFEKDEVPMLSESFAQRSDEPEDSNFRRLVSRTRSASMSIPMVPMEPYDREASLVGHTGPLRTVRKTPFPQMSGPLYATNGTGNPLQQSIVVRGNRVAENKAENFSNFRGTRENHQNNYYDRKNEHLLRSGQLGMCNDPYCTTCPTYFKAAQQANPRTSSRFDPKLHNVLYGDAKGFARKVCSFCSSCVPGVMNPHAKVVQQWNKILAIFCLVAIFVDPLYFFLLYVEKDNKCIIINWTMTTTLVLFRSLNDLVYFLNILLQFRLAYVSPESRVVGAGDLVDHPKKIALNYFWGHFFLDLFIVIPLPQIIILFVLPNYLGSSGANYAKNLLRAAILAQYVPRLYRFLPLLIGQSPTGFIFESAWGNFIINLLIFMLSGHVVGSFWYLFGLQRVNQCLRDACHNSTLTGCMDFIDCGYGHTRVPSETANQWNNNANATACLDSSSGIFEYGIYANAVPLTIKTDMVNKYVYSLFWGFQQISTLAGNQTPSYFTWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRKLEMQLRGRDVEQWMSHRRLPEDLRRRVRQAERYNWAATRGVNEEMLMENMPEDLQRDIRRHLFKFIKKVRIFALMDEPVLDAICERLRQKIYIKGSSILFQGGLVEKMVFVVRGKLESIGEDGTRVSLSEGDACGEELLRWYLEHSSVSTDGRKIRLPGQRLPSSYRTVSCLTNVEAFSLRAADLEELTILFMRFLRSPRVQGALRYESSYWRSLAATRIQVAWRYRKKRLNRAASKSD* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2655 768 MobiDBLite consensus disorder prediction 1 30 - -
Dod02g2655 768 SUPERFAMILY Voltage-gated potassium channels 200 528 - -
Dod02g2655 768 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 765 - -
Dod02g2655 768 Gene3D - 206 525 - -
Dod02g2655 768 Pfam Ion transport protein 205 527 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod02g2655 768 Gene3D Helix hairpin bin 527 592 - -
Dod02g2655 768 SMART cnmp_10 600 736 IPR000595 -
Dod02g2655 768 SUPERFAMILY cAMP-binding domain-like 528 718 IPR018490 -
Dod02g2655 768 CDD CAP_ED 600 717 IPR000595 -
Dod02g2655 768 Gene3D Jelly Rolls 598 723 IPR014710 -
Dod02g2655 768 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 765 - -
Dod02g2655 768 ProSiteProfiles cAMP/cGMP binding motif profile. 600 668 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2655 Dod-Chr2 58417160 58427758 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2655 5 678 Ion Channels AT3G17700 61.561 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2655 K05391 - ccaj:109789004 1222.61