Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2646 ATGGCTGCTATTGCTAACAACGTTGTTGTTGTTGGGGCAGCTCCCCTTTCTCAAACTCTATCGTTACCCATCGCAAATTCTCTCACTTTCACCCATAATACTAAGACTCAGACACACAGAATTCATCTTAGTTGCCCCAAAACCAACGACAGAACAAGGCGTTTCCCGTTTCCCACTTCATCACCACTCAGCAACAAAGGTACTTGCTTTGTGTTGGCGTGTCTCCCTCCACATGCTTCTTCTTCTTCTTCTTCTTCTGAGTCCTCAAGCTCGTCTTCTAATCCAAGACAAAGTTCTGTTGCTCCTTCAACTAGGCTTTATGTTTGCGGGCTATCTTTTCGAACCACTGAAGAGAGCTTGCGAAATGCATTTGAGAATTTTGGTCAACTTGTAGAAGTGAATCTGGTGATGGATAAAATTGCAAACAGACCAAGAGGTTTTGCTTTTCTTAGATATGCAACTGAAGAGGAATCTCAGAAGGCTATTGAGGGAATGCATGGTAAGGTATGA 510 0.4314 MAAIANNVVVVGAAPLSQTLSLPIANSLTFTHNTKTQTHRIHLSCPKTNDRTRRFPFPTSSPLSNKGTCFVLACLPPHASSSSSSSESSSSSSNPRQSSVAPSTRLYVCGLSFRTTEESLRNAFENFGQLVEVNLVMDKIANRPRGFAFLRYATEEESQKAIEGMHGKV* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2646 169 Gene3D - 76 169 IPR012677 -
Dod02g2646 169 PANTHER RNA-BINDING PROTEIN 1 30 168 - -
Dod02g2646 169 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 104 169 IPR000504 GO:0003723
Dod02g2646 169 SUPERFAMILY RNA-binding domain, RBD 79 168 IPR035979 GO:0003676
Dod02g2646 169 MobiDBLite consensus disorder prediction 78 100 - -
Dod02g2646 169 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 106 168 IPR000504 GO:0003723
Dod02g2646 169 PANTHER TRANSFORMER-2-RELATED 30 168 - -
Dod02g2646 169 SMART rrm1_1 105 169 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2646 Dod-Chr2 58270676 58272998 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2646 106 163 C2H2 Transcription Factor Family AT2G19380 34.483 1.95e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2646 - - ahf:112802436 177.178