Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2644 ATGTCACCTGTTGGATTACCTCCTGGCTTTAGGTTTCATCCAACTGATGAAGAGCTTGTCAACTATTATCTCAAGAGAAAGATCCATGGACAAGAAATTGAACTTGACATCATTCCTGAGGTTGATCTCTACAAATGTGAACCATGGGAATTAGCAGAGAAGTCATTTTTGCCAAGTAGAGACCCAGAGTGGTATTTCTTTGGACCCCGGGATAGGAAATACCCCAATGGTTTCAGAACAAATAGAGCAACAAGAGCCGGGTACTGGAAGTCCACTGGGAAAGACAGGAGAGTCTCATGCCAAAGCAGACCTATTGGTATGAAGAAGACTTTGGTTTACTACAGAGGCAGGGCTCCTCAAGGTATCAGAACTGACTGGGTAATGCATGAGTATCGCCTCGATGACAAAGACTGTGAGGACACCACTGGATTGCAGGATACTTATGCATTGTGCCGGGTGTTCAAGAAAAATGGAATCTGTTCTGATGTTGAGGAGCAACAAGGGCAATGTAGTGTGTCACTAATTGAGAGCTCCCAAACCATAATCAATAATGAGTGTGAAACAATGTCTCCAGATATACCAGGGGCATCATCTTCATGCTTGGAAGAGGAAGACAAAGATGATTCATGGATGCAGTTCATCACAGAAGATGCATGGTATTCTTCTAATGCAGCAATGGCTGGTGGTGAAGAAGTGTCACATGTTGCATTTACAAACTAA 720 0.4333 MSPVGLPPGFRFHPTDEELVNYYLKRKIHGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSCQSRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKDCEDTTGLQDTYALCRVFKKNGICSDVEEQQGQCSVSLIESSQTIINNECETMSPDIPGASSSCLEEEDKDDSWMQFITEDAWYSSNAAMAGGEEVSHVAFTN* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2644 239 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Dod02g2644 239 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Dod02g2644 239 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 239 - -
Dod02g2644 239 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Dod02g2644 239 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Dod02g2644 239 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2644 Dod-Chr2 58259874 58263950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2644 1 232 NAC Transcription Factor Family AT3G17730 76.016 9.62e-134 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod02g2644 NAM 1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2644 - - gmx:100784495 484.952