Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2643 ATGGTCAGAAAGAAGAGAACTGAAGGAACTAGTGGGGGTGAAAGCTCTGAGGCTCAACGCCCTGCTGAAAGGAGTGCTCCATCCCCACAACAGGCTCCTCCTTCAGGAGGGCCAGGGCCTCAGGGGGGAGGTAGGGCATGGGGTCCCCAAGGAGGACGCGGGGGTTATGGAGGGGGACGGGGCCGCGGAATGCCCCAGCAGCAGTATGGTGCTCCCCCTGAATATCAAGCTAGGGGGAGGGGAGGACCTCCCCAGCAAGTTTATGCTTCCCGTGGAGGATATGCTGGCGGCCGTGGTAGCGGTGGTGGTGTGGGTGGTGGCCGTGGCGTAGGACCTTCTTATGGTGGCCCACCATCCCGGCCCCAAATACCCGAGCTGCACCAAGCAACCCCAGTACAGTATCAAGCTGCGTTGACTCCTCCGCCTCCACCATCTGAGGCCAGTTCTTCTTCTTCCCAGCTGCCGGAGATGCCCCAAGTGGAGCAGCAAATGGAGCAGATGACAATTCATTCAGAAGGTGCTTCTTCTGGTCCACCTGCTAGTAAATCATCAATGAGGTTTCCCCTTCGCCCTGGCAAGGGTAGCTATGGCACCAAATGTGTTGTCAAGGCCAACCATTTCTTTGCCGAGTTACCAAACAAGGATCTCCACCAGTATGATGTGACAATCACTCCAGAAGTGACTTCAAGAGGTGTGAACCGAGCTGTTATGGAGGAGCTGGTGAGGCTGTACCGCGAATCTCACTTGGGAAAGAGACTTCCTGCTTATGATGGGCGAAAGAGTCTCTACACAGCTGGTCCACTGCCCTTCATGTCAAAGGAGTTCAGGATCACCCTCATTGATGAAGATGATGGAACAGGAGGACAAAGGAGGGAGAGGGAGTTCAAGGTTGTGATAAAATTGGCTGCTCGGGCAGACCTTCATCATTTAGGTCTCTTTTTGCAGGGGAGGCAAACCGACGCACCTCAGGAAGCTCTGCAGGTTCTTGACATTGTTCTGCGTGAACTCCCTACAACCAGGTATTGTCCTGTAGGAAGATCATTTTATTCACCTGATCTGGGCAGGAGGCAGCCTTTAGGCGAGGGCTTAGAAAGCTGGCGTGGTTTCTATCAAAGTATCCGTCCCACACAGATGGGACTGTCTTTGAACATTGATATGTCCTCCACTGCATTTATTGAGCCATTGCCTGTCATCGACTTTGTAACTCAGCTACTGAACAGGGATGTTTCCACCCGACCACTGTCTGATGCTGATCGCGTGAAGATAAAAAAAGCACTGCGTGGCATCAAAGTTGAAGTAACTCACCGTGGAAACATGAGAAGAAAGTATCGCATCTCTGGTCTGACTTCCCAGGCTACTAGAGAATTGACATTCCCTGTAGATGAGAGGGGAACGATGAAATCTGTGGTTGAGTATTTCTATGAAACATATGGTTTTGTCATTCAACATACTCAGTGGCCTTGTTTGCAAGTCGGGAATACCCAGAGACCTAACTATCTGCCAATGGAGGTTTGCAAGATAGTAGAAGGGCAGAGGTATTCAAAGAGGTTGAATGAGAGGCAAATTACTGCTTTGCTCAAAGTCACATGCCAGCGACCTGTTGAAAGGGAGCGTGATATCATGCAGACAGTACATCACAATGCCTATCATGAAGATCCTTATGCTAAGGAGTTTGGTATCAAAATCAGTGAGAAGCTTGCTCAAGTTGAAGCTCGCATTCTACCGGCACCTTGGCTCAAATATCATGATACTGGTAGAGAGAAGGATTGCCTACCTCAAGTTGGTCAATGGAATATGATGAATAAGAAAATGGTTAATGGGGGAACAGTCAACTACTGGTTCTGTATAAACTTTTCAAGGAATGTTCAAGATAGTGTTGCCCGTAGCTTTTGTTATGAGCTTGCCCAGATGTGTCATATATCTGGCATGACATTCAACCCAGAGCCAGTAGTCCCTCCAATCAGTGCTCGTCCTGACCAAGTTGAGAAGGTTCTGAAAACTCGGTACTATGATGCCAAGAACAGACTGCCTGGGAAGGATCTTGATTTGCTTATTGTTATTCTGCCTGATAATAATGGTTCCCTTTATGGTGACCTCAAACGTATTTGTGAGACTGATCTTGGGCTTGTTTCCCAATGTTGTTTAACGAAGCATGTCTTTAAAATGAGCAAACAGTATCTTGCTAATGTAGCTTTGAAGATTAATGTTAAGGTAGGAGGAAGGAACACTGTGCTTGTTGATGCTCTTTCACGACGCATTCCCTTAGTCAGTGACAGGCCTACTATTATTTTTGGAGCTGATGTGACTCATCCCCACCCTGGAGAGGATTCAAGCCCGTCAATTGCAGCTGTTGTGGCTTCCCAAGACTGGCCTGAGATTACAAAGTATGCTGGTTTGGTTTGTGCCCAAGCACATCGACAGGAGCTCATTCAAGATCTTTTCAAACAATGGCAAGATCCAGCCAGAGGAACAGTAACTGGTGGAATGATAAAGGAGCTACTTATATCTTTCCGCAGGGCTACAGGGCAGAAGCCACAACGCATCATATTTTACAGGGATGGTGTGAGTGAGGGGCAATTTTATCAAGTTCTATTGTTCGAGCTCGATGCTATACGAAAGGCATGTGCATCCCTTGAGCCCAATTATCAGCCTCCTGTGACTTTTGTGGTAGTTCAAAAGCGTCATCACACGAGGCTCTTTGCCAGCAACCACCATGACAAGAGTTCAGTTGACAGGAGCGGGAATATATTGCCCGGCACTGTTGTAGACTCAAAAATCTGCCATCCTACTGAATTTGACTTCTATCTCTGTAGCCATGCTGGAATTCAGGGCACGAGCCGTCCAGCTCATTACCACGTCCTGTGGGATGAAAACAATTTCACAGCCGATGCTTTGCAAATGCTAACGAACAACCTGTGCTACACTTATGCCAGATGCACCCGTTCTGTTTCAATTGTGCCTCCTGCATATTATGCCCACTTGGCTGCATTCCGAGCTCGCTTCTATATGGAGCCGGAGACTTCAGACAGTGGGTCCATGACAAGCGGTGCCATGGCGGGTCGCGGAATGGGTGGTGGTGCGGGACGCAGTACACGTGCACCTGGTGCCAGTGCTGCAGTGAGGCCCCTTCCATCCCTCAAGGACAATGTCAAGAGGGTCATGTTCTATTGCTGA 3174 0.4893 MVRKKRTEGTSGGESSEAQRPAERSAPSPQQAPPSGGPGPQGGGRAWGPQGGRGGYGGGRGRGMPQQQYGAPPEYQARGRGGPPQQVYASRGGYAGGRGSGGGVGGGRGVGPSYGGPPSRPQIPELHQATPVQYQAALTPPPPPSEASSSSSQLPEMPQVEQQMEQMTIHSEGASSGPPASKSSMRFPLRPGKGSYGTKCVVKANHFFAELPNKDLHQYDVTITPEVTSRGVNRAVMEELVRLYRESHLGKRLPAYDGRKSLYTAGPLPFMSKEFRITLIDEDDGTGGQRREREFKVVIKLAARADLHHLGLFLQGRQTDAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSTRPLSDADRVKIKKALRGIKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFYETYGFVIQHTQWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPVERERDIMQTVHHNAYHEDPYAKEFGIKISEKLAQVEARILPAPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNYWFCINFSRNVQDSVARSFCYELAQMCHISGMTFNPEPVVPPISARPDQVEKVLKTRYYDAKNRLPGKDLDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKQWQDPARGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHHDKSSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQMLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGAMAGRGMGGGAGRSTRAPGASAAVRPLPSLKDNVKRVMFYC* 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2643 1057 MobiDBLite consensus disorder prediction 1 190 - -
Dod02g2643 1057 SMART PAZ_2_a_3 399 531 IPR003100 GO:0005515
Dod02g2643 1057 Pfam N-terminal domain of argonaute 198 333 IPR032474 -
Dod02g2643 1057 MobiDBLite consensus disorder prediction 1012 1039 - -
Dod02g2643 1057 CDD Piwi_ago-like 553 1003 IPR045246 -
Dod02g2643 1057 Gene3D - 573 746 - -
Dod02g2643 1057 Pfam Piwi domain 684 1003 IPR003165 GO:0003676
Dod02g2643 1057 Pfam PAZ domain 399 524 IPR003100 GO:0005515
Dod02g2643 1057 PANTHER PROTEIN ARGONAUTE 1A 90 1056 - -
Dod02g2643 1057 SUPERFAMILY PAZ domain 201 546 IPR036085 GO:0005515
Dod02g2643 1057 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 90 1056 - -
Dod02g2643 1057 Gene3D paz domain 388 513 - -
Dod02g2643 1057 Pfam Glycine-rich region of argonaut 70 176 IPR024357 -
Dod02g2643 1057 MobiDBLite consensus disorder prediction 149 182 - -
Dod02g2643 1057 ProSiteProfiles Piwi domain profile. 683 1004 IPR003165 GO:0003676
Dod02g2643 1057 ProSiteProfiles PAZ domain profile. 395 509 IPR003100 GO:0005515
Dod02g2643 1057 SUPERFAMILY Ribonuclease H-like 669 1004 IPR012337 -
Dod02g2643 1057 CDD PAZ_argonaute_like 394 508 - -
Dod02g2643 1057 MobiDBLite consensus disorder prediction 12 26 - -
Dod02g2643 1057 Pfam Mid domain of argonaute 592 667 IPR032473 -
Dod02g2643 1057 Pfam Argonaute linker 1 domain 343 393 IPR014811 -
Dod02g2643 1057 SMART Piwi_a_2 683 1004 IPR003165 GO:0003676
Dod02g2643 1057 Gene3D - 752 1057 IPR036397 GO:0003676
Dod02g2643 1057 SMART DUF1785_2 342 394 IPR014811 -
Dod02g2643 1057 Pfam Argonaute linker 2 domain 535 581 IPR032472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2643 Dod-Chr2 58188819 58196225 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2643 74 1057 Eukaryotic Initiation Factors Gene Family AT1G48410 79.717 0.0 1622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2643 K11593 - gmx:100780375 1807.73