LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod02g2639	ATGGTGTCAAGATCTTATTCAAATCTTCTGGAACTTGCCTCTGGCGAGTCTCCATCATTTGGGAGCATGAACAGGGGAATCCCTCGGATTATGACTGTGGCTGGTTTGATATCTGATGTTGATGATGACCCTGTCGAGAGTGTGTGCTCCGACCCTTCTTCCTCCTCAGTACAAAGAGACAGGATCATAATAGTTGCAAATCAGCTCCCTATAAGGGCTCAGAGGAAACCAGATGGTAGTAGTGGTAACAGCAGGAACTGGTTCTTCACTTGGGATGAGAATTCACTTCTCCTCCAACTCAAAGATGGGTTAGGGGATATTAATGATGACACTGGGGTTATCTATGTTGGTTGCCTTAAGGAAGAAGTCCACCCAAATGAACAGGATGAGGTTTCACAGATACTTCTTGAGACCTTCAAGTGTGTCCCAACTTTCCTCCCTTCTGATCTCTTCACCAGGTACTACCATGGCTTCTGCAAGCAACAGTTGTGGCCACTGTTCCATTACATGCTGCCTCTTTCACCAGACCTTGGTGGCAGGTTCAATAGGTCACTGTGGCAAGCTTATGTCTCTGTCAATAAAATCTTTGCAGATAGGATCATGGAAGTTATTAACCCGGAAGATGATTATGTTTGGATACATGATTATCATTTGATGGTGTTGCCAACTTTCTTGAGGAAGAGGTTCAATAGAGTGAAGCTTGGATTCTTCCTTCATAGCCCATTCCCTTCATCAGAAATATACAAGACATTGCCTATTAGGGAAGAGCTCCTGAGAGCACTCCTGAATTCTGATTTGATTGGCTTCCACACATTTGATTATGCCAGGCATTTCCTCTCTTGTTGTAGTAGGATGCTTGGTCTTACCTATGAGTCCAAAAGGGGTTATATTGGAATTGAGTATTATGGTAGGACTGTTAGTATCAAGATTCTTCCTGTTGGCATACACATGGGTCAGCTTCAGTCAGTTTTGTGCATGCCAAAGACTGAAGAGAAAGTTTCCGAGCTCATTAGGCAGTTTTCTGACCAAGGCAAGACAATGTTACTTGGGGTGGATGACATGGACATCTTCAAGGGAATTAGCTTGAAGCTATTGGCCATGGAGCAGCTTCTCATTCAGCACCCTGAGTGTCAGGGAAAAGTTGTGCTTGTCCAGATAGCTAATCCTGCAAGGGGGAGAGGGAAGGATGTGAAAGAAGTGCAAGCTGAGACCAAGGCAACTGTGAAAAGGATCAATGAGACATTTGGGAAGCCAGGGTATGATCCTGTTATTCTGATTGAGGAGCCATTAAGGTTCTATGAGAGAGTTGCATACTATGTTGTTGCTGAGTGTTGTTTAGTCACTGCAGTGAGGGATGGAATGAACCTCATACCCTATGAGTATATAATCAGTCGCCAAGGCAATGAGAAGTTGGATAAAGTGTTAGGGCTAGCTTCCTCCCCTAAGAGAAGCATGTTGGTAGTGTCTGAGTTCATTGGCTGTTCCCCATCTTTGAGTGGAGCAATCAGAGTGAACCCTTGGAACATTGATGCAGTGGCAGAGGCAATGGATTCTGCACTTGAGATGGCTGAGTCAGAGAAACAGCTTAGGCATGAGAAGCATTACAGATATGTTAGCACTCATGATGTTGGATACTGGGCTCGTAGCTTCTTGCAAGATTTGGAAAGGACTTGTAGTGATCATGTGAGGAGAAGGTGGTGGGGGATTGGGTTTGGATTGAGTTTTAGAGTGGTAGCACTTGATCCAAACTTCAGGAAGCTCTCAATGGAGCATATAGTTTCAGCTTACAAGAGGACAACAACTAGGGCAATCCTTCTAGATTATGATGGTACACTGATGCCTCAGGCTTCCATTGATAAGAGCCCAACCAGTAACTCCATTAAGATGCTAAACAGTTTGTGTAGAGATAAGAACAACATGGTGTTTCTTGTCAGTGCTAGAAGCCGAAAGACACTTGCTGAATGGTTTTTACCTTGTGAGAATCTGGGAATTGCTGCTGAGCATGGTTACTTTCTAAGACTGAGAAGAGATGCAGAATGGGAAACGTGTGTATCTGCGACAGACTGTAGTTGGAAACAAATAGCAGAACCGGTAATGAAGCTTTATACTGAAACAACTGATGGATCCACCATTGAAGATAAGGAGACTGCACTTGTTTGGTGCTATGAAGACGCAGATCCGGATTTCGGTTCATGCCAAGCCAAGGAACTTCTTGATCATCTTGAAAGTGTGCTTGCAAATGAACCAGTAACAGTAAAGAGTGGTCAGAATAATGTAGAAGTTAAACCACAGGGTGTGAGCAAGGGGCTAGTGGCAAAACACCTACTTTCAACCATGCAAGAGAAGGGAATGTCACCGGACTTCGTTTTGTGCATAGGAGATGATCGGTCGGATGAAGACATGTTTGAGGAAATCACCAGTTCGATGGCTGGTCCTTCCATGGCACCCCGGGCTGAAGTATTTGCATGCACAGTCGGTCGAAAGCCCAGTAAGGCTAAGTACTATCTGGATGATACTGCTGAAATAGTGAGGCTGGTGCATGGTTTGGCCTCTGTCTCAGAGCAAATGGTTTTATTCTAG	2580	0.4446	MVSRSYSNLLELASGESPSFGSMNRGIPRIMTVAGLISDVDDDPVESVCSDPSSSSVQRDRIIIVANQLPIRAQRKPDGSSGNSRNWFFTWDENSLLLQLKDGLGDINDDTGVIYVGCLKEEVHPNEQDEVSQILLETFKCVPTFLPSDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGIEYYGRTVSIKILPVGIHMGQLQSVLCMPKTEEKVSELIRQFSDQGKTMLLGVDDMDIFKGISLKLLAMEQLLIQHPECQGKVVLVQIANPARGRGKDVKEVQAETKATVKRINETFGKPGYDPVILIEEPLRFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGLASSPKRSMLVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMDSALEMAESEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPTSNSIKMLNSLCRDKNNMVFLVSARSRKTLAEWFLPCENLGIAAEHGYFLRLRRDAEWETCVSATDCSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNNVEVKPQGVSKGLVAKHLLSTMQEKGMSPDFVLCIGDDRSDEDMFEEITSSMAGPSMAPRAEVFACTVGRKPSKAKYYLDDTAEIVRLVHGLASVSEQMVLF*	860

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod02g2639	859	Gene3D	-	601	733	IPR023214	-
	Dod02g2639	859	Gene3D	-	734	857	IPR023214	-
	Dod02g2639	859	CDD	HAD_TPP	603	844	-	-
	Dod02g2639	859	Gene3D	Glycogen Phosphorylase B;	53	321	-	-
	Dod02g2639	859	SUPERFAMILY	HAD-like	602	847	IPR036412	-
	Dod02g2639	859	Pfam	Trehalose-phosphatase	605	839	IPR003337	GO:0003824\|GO:0005992
	Dod02g2639	859	Pfam	Glycosyltransferase family 20	61	555	IPR001830	GO:0003824\|GO:0005992
	Dod02g2639	859	PANTHER	TREHALOSE-6-PHOSPHATE SYNTHASE	1	857	IPR001830	GO:0003824\|GO:0005992
	Dod02g2639	859	TIGRFAM	T6PP: trehalose-phosphatase	601	849	IPR003337	GO:0003824\|GO:0005992
	Dod02g2639	859	TIGRFAM	HAD-SF-IIB: HAD hydrolase, family IIB	604	803	IPR006379	-
	Dod02g2639	859	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	60	558	-	-
	Dod02g2639	859	CDD	GT20_TPS	61	555	IPR001830	GO:0003824\|GO:0005992
	Dod02g2639	859	Gene3D	Glycogen Phosphorylase B;	322	539	-	-
	Dod02g2639	859	PANTHER	ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6	1	857	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod02g2639	Dod-Chr2	58110118	58115176	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod02g2639	1	857	Trehalose Biosynthesis Gene Families	AT1G68020	81.661	0.0	1477

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod02g2639	K16055		-	tcc:18610041	1533.47