Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2602 ATGGAGTCTGGAAGGCTTTTCTTTGACCCCTCCGCTTGTCGCGGCAACAACATGCTCTTCCTCGGGAATGCTGATCTTACTTTTCGAGGAAGATCGATGATGAGCATGGAGGAAAGCTCAAAGAGGCGACCTTTCTTTAGCTCGCCGGAGGAACTGTTTGATGACGAGTACTATGAGGAGCAGCTGCCGGAGAAGAAGCGCCGCCTCACTTCTGAGCAGGTCCTGCTGTTGGAGAAGAGCTTTGAGGAAGAGAACAAGCTGGAGCCGGAGAGGAAGACCCAGTTGGCCAAGAAGCTGGGGTTGCAGCCCAGGCAGGTGGCTGTGTGGTTCCAGAACCGCAGGGCTCGATGGAAGACCAAGCAGCTTGAAAGGGATTATGATGTTCTCAAGGCTTCCTATGATTCCCTACTTTCAACATATGATTCCATTGCGAAGGAGAATGAGAAACTGAAATCTGAGGTGGTAACCTTAAATGAGAAGCTTCAAGTTCAAGCTAAAGAGATGCCTGGAGAGCCAATATCAGACAAAAAAGCTGACCCACTTCCACTGGATATAGCTCAAATCTTCAGCATGAAGGTGGAGGACCGCCTGAGTACCGGGAGTGTTGGAAGTGCAGTGGTGGATCAGGGTAGTCCCCAGCTTGTTGTTGACAGTGTTGATTCATACTTCCCTGCTGACAACTATGGTAGTTGCATCAACACACTAGAGAGGGTTCACTCAGAGGAGGATGATGGGAGTGATGATGGGAGGAGTTACTTCTCAGATGTGTTTGTGGCGGCCGAAATTGAGCACCAAAACCAAGAGGAAGGAGAGGGAATGGGTTGGTGGGGTAATATGTTGAACAATGCAACAGTGCTTCTTTAA 864 0.4954 MESGRLFFDPSACRGNNMLFLGNADLTFRGRSMMSMEESSKRRPFFSSPEELFDDEYYEEQLPEKKRRLTSEQVLLLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDSLLSTYDSIAKENEKLKSEVVTLNEKLQVQAKEMPGEPISDKKADPLPLDIAQIFSMKVEDRLSTGSVGSAVVDQGSPQLVVDSVDSYFPADNYGSCINTLERVHSEEDDGSDDGRSYFSDVFVAAEIEHQNQEEGEGMGWWGNMLNNATVLL* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2602 287 Pfam Homeobox associated leucine zipper 120 162 IPR003106 GO:0006355|GO:0043565
Dod02g2602 287 Gene3D - 58 127 - -
Dod02g2602 287 PRINTS Lambda-repressor HTH signature 91 100 IPR000047 GO:0003677
Dod02g2602 287 PRINTS Lambda-repressor HTH signature 100 116 IPR000047 GO:0003677
Dod02g2602 287 ProSiteProfiles 'Homeobox' domain profile. 60 120 IPR001356 GO:0003677
Dod02g2602 287 SUPERFAMILY Homeodomain-like 57 122 IPR009057 -
Dod02g2602 287 SMART HOX_1 63 124 IPR001356 GO:0003677
Dod02g2602 287 Coils Coil 133 167 - -
Dod02g2602 287 Pfam Homeodomain 65 118 IPR001356 GO:0003677
Dod02g2602 287 CDD homeodomain 65 121 IPR001356 GO:0003677
Dod02g2602 287 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT5 1 260 - -
Dod02g2602 287 ProSitePatterns 'Homeobox' domain signature. 95 118 IPR017970 GO:0000981|GO:0006355
Dod02g2602 287 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 260 IPR045224 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2602 Dod-Chr2 57553703 57556806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2602 1 277 Homeobox Transcription Factor Family AT3G01470 60.424 9.43e-104 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dod02g2602 Homeodomain 8.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2602 K09338 - gmx:100797836 423.32