Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2600 ATGATCATGGAACTCACCGATTCCGGTTCCGCCGGCGACCGCGTTGTTCCGCCGCCGCAAGACTCTCGCTCCGGCCTCGGAATCGACCTCAACGAGATCCCCTTCGCCGCTGCTTCTCCTTCTTCCGTCGCCGAAACCCTACCAACGCCGCCGCCACCGGACTCCGCCGTCGACATCGTCCGCGCTTACCACGAGAACCCTGCGCCGCCGCCCGGCGCTCCCGCCTCGCTACCCCGCGGCTCACCTCCCTGCGCAGCCTGCGGAAAGGCAGGGGCCGCCGGCGTCGTCGTCTGCGACGGCTGCGAGCGCGGGTTCCATGTCTCCTGCGCCGGGATTCGCGGCGGCGGCCGACAGGCTGCTGGCCTTGACGAGTGGCTCTGCGGCGAGTGCGTCGACAGCGGAGTGAGGAGCAAGCGGTGGCCGCTTGGCGTCAAGTCCAAGCAGCTCCTTGACATCAATTCTTCGCCGCCCAGCGACGCAGACGGCGACGGTGCCGCTGAGGATTTGCAAGATTTGAGAAAGCACACGCTGGGTGATAATTCTTTTGGTGCCAATCCATTTGGTGCCCCAGTGACATGCTCAAACTACTACAATGGAAATGCTTTTGGCTTCCAAAAGGCATCGGGAGTTGTAACACATGCTGTTAGAGTGGGTTTTGAGGATATATTGAATCATACCCAATCAATGACTAGATGTTTTGAGGAGGCTCTTAGAGATTTTATATCTGAAAGGCGTGGTGTACTAGAGGAAGGTTGGCGAGTGGAATTTAGACAATCAATGAACAACTCTGAACTGTATGCAGTGTACTGTGCTCCTGATGGGAAGATTTTTGATTCTGTATATGAAGTAGCTTGTTATCTGGGGCTAACGCCTGGGTACAATTCTGTGGAATCTGAAGTGAGACATGATAGGTCTCTCTCTTCATTAGGTGGGACTCATCTATCCAGAAAAAGAAAGTCAACAAGGAATCTGTTAGCTAATGGTTTTGCAGATAAGTGTGGAACCTTGATCAATAGTTGTAAGGATTCTCCTTCAGATGGTTTAAGCGTCGAGTGTGCTGGTGATCGTGAGCATCTCCCCAAAGCCACAGAAATTGCAAGAAAAGAGGATGTTCGTCCTGGTCCTCACCAGTCTGCTGATGGACTTCCTCTACAGTTCCAGGATTTCTTTGTTCTCTCTTTGGGAAAAGTTGATGGTAGACCTTCATATTATGATCTTCACCTTATCTGTCCTGTAGGTTATAAATCTTGTTGGCATGATAAGATTACTGGTTCTCTTTTTACATGTGAAGTTTTGGAGGGTGGTGATTCTGGACCTATATTTAGGATCAGAAGGGGTTCTTGTTCAGAATTTCCTGTTCCAGTTGGGTCTACCATCCTCTCAACATCAACTCTTTGTCAATTTATGAGTCAAACTAATGAAGAAGGTCTGCCAAAGGCTGATGATAGTATGGATTATGGTGGTGATGAAAATATCCAGATGATGCTTTCAGATCCTTGTGTGCCAACAGAAAATGATGTCATGAATTGCGTTGCAAGTTGCTCAAATGATGCATGTGATATTCGTACATCAGACATGCTACATCCCGTTCCTGTTTCAGTTTGTGATCAAACTAGAAATTCATTATCTGATGATTCAGGGTTGATTTATGGAATTGGTGAAATTTTGGTGGAAGAGCGGTCATCATCTGCAGCTTGGAGAGTTATGTCTCAAAAGTTAGTTAATGCTTGCAGTGATATCTGCAAGCAGAAAGGAACTCTCAAGTTCTATTGTAAACATGTTGAAAATGAACCATGCTTGCTTAAATGGGACATAAAAAATGGAAAAAGTGATGCACATTTTTCGTCATTGGATAAGTTTTGTGGTTCACTTGGTTTGGTCAGCATCCCAGATGTAGTTTATGCAGACAATGATCTTAAAAGTCTCTATGAGGTTTTAGGAAAATGGTTGGATCAAGATAGATTTGGATTAGATGTTGAATTTGTGCAAGAAGTATTAGAACAGCTTCCTGGCATCCAAGACTATTTGAAGTATGAACTTCTAAGTAGTCGAAATAATAGCTCTTCATTGCCAACGGTTGAGAATGGTTTCCTAGTGGTTGAATGGAGAGGTGGATCACAATACCAGGAAGAAGAAGAAGTGGTTCAAGGTTTTTATAAGAGACCCAAAAAAGTGAGATTGACCGAAACGTGCGTAAAGGAAGATCGTTGTCCACCTCCTGGGAAGCCACTATGTTCTAGGGTTCCTAGTGAGCTTATTGGTGACATTTTTCAGGCTTGGGAGCTTCTAGAGCGATTTGATGAAATTTTGGACCTGAAAGAACCATTGTCATTGGATGAGCTGGAGAAGGAACTTATCAACCCATGGTTTGATGGATCGGATTTTCTTGAGAAATCTGAGAGGGAAATTGGTGATGGTCAAGTTTTGAGTATTCAAGGAGCTGATGGTAATTGTAGACCGATATTGTCCCCACGTTGTGAAGCTGGTCCATCAGGTTCTGTAGAAAGTTCCCATGCATTTATTCAAGTGGAAACAGAAGCAATGAAAGAGGCAGCTCAAGTTAAGCTCGCATCTTTCACTTATGCCAGATGCTTTGGTGTAGCTTTGACCAAGGCTCATAATTCATTGCTAAGAGTGCTAATTGGTGAACTGCAATCAAAGGTGGCTGCTCATGTGGATCCAAATTTTGAACCTGGAGAGACTAAAACAAGACGAGGAAAAAGGAAAGATATAGATAGTGCTGTTCCTGGTAAACGAACAAAGCTCAATATGCTTCCTATTAATGAATTGACTTGGCCGGAATTAGCTCGCCGATATATCTTGGCTGTCTTATCAATGGATGGGAACCTTGAGTCTACTGAAATTACTGCTCGTGAAAGTGGTAAGGTCTTTCGATGCTTACGAGGTGATGGTGGTTTGCTGTGTGGTTCCCTTACTGGTGTGGCTGGGATGGAAGCAGATGCACTGTTGCTTGCCGAAGCTACAAGGAAAATTTTTGGTTCTTTGAGCAGAGACAATGATTTACTAACCATGGAAGAAGAGGAGTCTGATGCGAATGGTGCTTCTGAAAAAAATTCAGGGAATGATGGTAATATTCCTGAATGGGCACAGATGCTAGAACCTGTCAAAAAGTTACCAACAAATGTGGGAACCCGAATCAGAAAGTGTGTCTATGATGCACTGGCTAAGGATCCACCAGAGTGGGCAAGGAAAAGACTGGAGCATTCAATTAGTAAGGAAGTGTACAAGGGCAATGCTTCTGGACCAACGAAGAAAGCAGTTCTTTCAGTGTTAGCTGATGTAGCTGGTGGAGTGCAACAGAATCCCAATAAAGGAAGGAAAAAGAAGATTGTTATATCTATTTCTAACATTATCATGAAACAATGTCGCATTGTATTACGTCGTGCAGCTGCTGCAGATGAGTCAAAGGTTTTCTGCAATTTGCTGGGCAGAAAGTTAATAAATTCTTCGGATAATGATGATGAGGGGCTTCTTGGATCTCCAGCTATGGTGGCCCGTCCTCTTGACTTCCGCACTATTGACCTAAGACTAGCTGCTGAAGCTTATGGTGGATCTCATGAAGCTTTCTTTGAGGATGTCAGGGAGCTGTGGAACAATGTTCGTGTTGCTTTTGGGGATCAACCTGATTTAGTTGAACTGGCCGATAACTTATCCGAGAATTTTGAATCACTGTATAATGAGGAGGTTGTCACCTATTTTGAAAAATTTGTGGAGTATTCTAAACTGGGATGCTTAAGTGCAGAATTGAGAAAAGAAGTTAATGATTTTATTGTCTCAACAAGTGAGATTCCTAAAGCGCCTTGGGATGAGGGAGTCTGTAAAGTATGTGGCATTGATAGGGATGATGACAGTGTCCTACTGTGTGATACTTGTGATGCTGAGTATCATACATATTGCCTGAATCCTCCACTTGCAAGGATCCCTGAAGGAAACTGGTACTGCCCTTCTTGTGTTGATGGCAAACATGCAACTCATGATGTTACAGATTGTACAAGGCTTATTGGCAAACGTCAAAATAAGAAGCTTCAGGGAGAAGTCAATTCTCTTTACTTGGAAGCTCTCACTCATTTATCTGCTGTAATGGAAGAAAAAGAATACTGGGAGTACAGCGTGGGCGAGAGAACGTTCCTTCTGAAGTTTTTGTGTGATGAGTTGCTTAACTCCTCCCTGATACGCCAGCACCTTGAGCAATGTGCAGATATGTCTGCCGAGTTACATCAGAAATTGCGTGCACTCTCTGTAGAATGGAAAAGCCTGAAAACTAAAGAAGATATCTTAACCACAAAAGCTGCAAGAATTGTTACATGCATGCCAAATGCCACTGGAGAAGTTGGTCCTAAGGAAGGGTTTCTCTCTAGCACTGGTAAATGTCTGGTCCAGCCACATAATGCAATTGACAGTCCTAATAATTATGGGGTATTAGTTGATCGTCTGTCTTCAGAAGAGGTTGCTAAAGAGAAGTATAGGCTCAATGGTATTGATAAATGTGCATCTGTGACAAATTCAGACACTGATAGCCAACATATGAATTCCATAGATGTAGACGAACAACTCAGGAATGTCCCTGTGGCTGTGGAATCCCAATGTATGGATAAATCCACAAAATCTTTTGCCTCGCCGAGTCATGTGCCTCAAGAACAAAATGGCTCTGGTGGAGCAGCTCATATCCAGAGTAATCACCAGAAATGTGAGGGAAAGGACATATCTACTCCTGTGACTGACCAGCAAGGACAATGTATCCCTGTTGATGAGTCAGAACCCTACCACCTTGAGCTCAATGCCATCAAGCGTGATATTTCAGTAGTAGAAGAGTCCATAAGTGGTGTAGGATCACAGCTGTTGAAGCTCTCCATTCGTCGGGAGTTTTTGGGAATTGACACCATTGGTAGACTGTACTGGGCTTCGGCTGTACGTGGAGGACGTTCATGGATAGTTGTTGATGCAAGTGCTGTGTTGCGTGGAAGAGGAATGGCAGTTAGCAGAGATTCTGTGGGTAAGTTTTCTTCTCTGCAGCATTGTGTACTACCTGACAAGGATAACTATAAGATGTTAGGGGTTATGAAGGACACCTCTCCTTTAATGTCTCAAGCAAGTGATGCTTTGGGCATTAGCTCTCCATGGACTGCTTATGAAACTGATGCAGAAATTCAAGACCTTTTAGGTTGGCTGAAGGAAAATGACCCTAAAGAAAAAGAACTGAAAGATTCCATTATGCTGAGGCCAAAACCAAGAGTTCAAGAGTTTCTTAACAAACAGACTGAAGGTCAGGTTGAGGACCAAGGACCTCTTTCTATGCCAGGAAATAGAGAGAAAACAGTATCTAGCTCTCTTGTTACAAAGGCAACTTCTTTGCTGGAAAAGAAATATGGTCCCTTCTTTGACTGGGATGCCACTGAGGTGTCAAAGAAGAGAAGTAAAAAAGCCAGAACAAATAATGATGAAAAGTTATATAGGTGTGAATGCCTAGAACCCATATGGCCTTCTAGAAAGCACTGTATGTCTTGCCACAAAACTGTTTTGAGTGATGTTGAACTGGAGGGACACAATGATGGCAAATGTAATGTGGGTCTTCCGGCCTTGGAGAAGAATAAGGATAGTAGTGCATCATCTAAAGGAAGAGGGAACTTGAAATATGATTCCTCCCGTGAAAAATTCAGAGGTGATGCAGACACAGCTGAAACTGCAAATAATGATTGTTCTAAGCTTAGCTCAAGATTGATCAAATTCTCAAATGAAGAATCCGCTTGCCCGTTTAACTTTGAAGATATATGTTCCAAGTTTGTGACAAATGATTCCTGCAAGGAACTTGTCAGAGAAGTAGGTCTTATTGGTTCTGATGGGGTCCCATCCTTTGTTCCTTCCATATCTCCTTTTGTTAGTGATTCTACAGTTATGCTATTATCAGCTCAAAAGGATGATATTGGAGGTGCATCCAAAGATACAGAAAGCCAGGTTTCTCAGGGAAGCACTGATGGTGCTGGCAAGTGCCATGATAAAAAATCCGGCATAACTTTAGCTGTAACTGAAAGCAGTAAAGCAGGAAAATCCAACAAATCATCTTCAGAACGAAGAGATGGAAAGTGCTCGGATTGTAGTCCTGCTTCAGATATAGGGGTAGATGGCTGCTGTGTGGTCCCCTTGTCTTCTTTGAGACCACTAGTTGGAAAAGTTTCACCCATTTTGAGGCAACTGAAGATCAGTCTACTTGACATGGATGCTGCACTCCCGAAAGTTGCTCTGAGACCATCAAAGGCACCGTCGGACAGAAGACAGGCATGGCGTTCATTTGTTAAATCTGCAGAGACTATATATGAGATGATTCAGGCAACAATTACACTAGAGGATATGATTAAGACAGAGTACTTAAGAAATGACTGGTGGTATTGGTCATCATTCTCTGCTGCTGCCAAATCTTCTGCTTTGCCTTCCCTTGCCCTTCGCATATACTCCCTTGATTCAGCCATTATATATGAGAAAATGCTGAATTCAAGTTTTGCTGACAGCTCTGAACCTTCTGCCGTAGCAGAACAGAAACCACTGATCACTGTGGATGCAGAGAAGTTGAAAGCAAGCAGGAAGTCAAGTAGGAAAAGGAAGGAACCAGATGGTTGA 6633 0.4383 MIMELTDSGSAGDRVVPPPQDSRSGLGIDLNEIPFAAASPSSVAETLPTPPPPDSAVDIVRAYHENPAPPPGAPASLPRGSPPCAACGKAGAAGVVVCDGCERGFHVSCAGIRGGGRQAAGLDEWLCGECVDSGVRSKRWPLGVKSKQLLDINSSPPSDADGDGAAEDLQDLRKHTLGDNSFGANPFGAPVTCSNYYNGNAFGFQKASGVVTHAVRVGFEDILNHTQSMTRCFEEALRDFISERRGVLEEGWRVEFRQSMNNSELYAVYCAPDGKIFDSVYEVACYLGLTPGYNSVESEVRHDRSLSSLGGTHLSRKRKSTRNLLANGFADKCGTLINSCKDSPSDGLSVECAGDREHLPKATEIARKEDVRPGPHQSADGLPLQFQDFFVLSLGKVDGRPSYYDLHLICPVGYKSCWHDKITGSLFTCEVLEGGDSGPIFRIRRGSCSEFPVPVGSTILSTSTLCQFMSQTNEEGLPKADDSMDYGGDENIQMMLSDPCVPTENDVMNCVASCSNDACDIRTSDMLHPVPVSVCDQTRNSLSDDSGLIYGIGEILVEERSSSAAWRVMSQKLVNACSDICKQKGTLKFYCKHVENEPCLLKWDIKNGKSDAHFSSLDKFCGSLGLVSIPDVVYADNDLKSLYEVLGKWLDQDRFGLDVEFVQEVLEQLPGIQDYLKYELLSSRNNSSSLPTVENGFLVVEWRGGSQYQEEEEVVQGFYKRPKKVRLTETCVKEDRCPPPGKPLCSRVPSELIGDIFQAWELLERFDEILDLKEPLSLDELEKELINPWFDGSDFLEKSEREIGDGQVLSIQGADGNCRPILSPRCEAGPSGSVESSHAFIQVETEAMKEAAQVKLASFTYARCFGVALTKAHNSLLRVLIGELQSKVAAHVDPNFEPGETKTRRGKRKDIDSAVPGKRTKLNMLPINELTWPELARRYILAVLSMDGNLESTEITARESGKVFRCLRGDGGLLCGSLTGVAGMEADALLLAEATRKIFGSLSRDNDLLTMEEEESDANGASEKNSGNDGNIPEWAQMLEPVKKLPTNVGTRIRKCVYDALAKDPPEWARKRLEHSISKEVYKGNASGPTKKAVLSVLADVAGGVQQNPNKGRKKKIVISISNIIMKQCRIVLRRAAAADESKVFCNLLGRKLINSSDNDDEGLLGSPAMVARPLDFRTIDLRLAAEAYGGSHEAFFEDVRELWNNVRVAFGDQPDLVELADNLSENFESLYNEEVVTYFEKFVEYSKLGCLSAELRKEVNDFIVSTSEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVDGKHATHDVTDCTRLIGKRQNKKLQGEVNSLYLEALTHLSAVMEEKEYWEYSVGERTFLLKFLCDELLNSSLIRQHLEQCADMSAELHQKLRALSVEWKSLKTKEDILTTKAARIVTCMPNATGEVGPKEGFLSSTGKCLVQPHNAIDSPNNYGVLVDRLSSEEVAKEKYRLNGIDKCASVTNSDTDSQHMNSIDVDEQLRNVPVAVESQCMDKSTKSFASPSHVPQEQNGSGGAAHIQSNHQKCEGKDISTPVTDQQGQCIPVDESEPYHLELNAIKRDISVVEESISGVGSQLLKLSIRREFLGIDTIGRLYWASAVRGGRSWIVVDASAVLRGRGMAVSRDSVGKFSSLQHCVLPDKDNYKMLGVMKDTSPLMSQASDALGISSPWTAYETDAEIQDLLGWLKENDPKEKELKDSIMLRPKPRVQEFLNKQTEGQVEDQGPLSMPGNREKTVSSSLVTKATSLLEKKYGPFFDWDATEVSKKRSKKARTNNDEKLYRCECLEPIWPSRKHCMSCHKTVLSDVELEGHNDGKCNVGLPALEKNKDSSASSKGRGNLKYDSSREKFRGDADTAETANNDCSKLSSRLIKFSNEESACPFNFEDICSKFVTNDSCKELVREVGLIGSDGVPSFVPSISPFVSDSTVMLLSAQKDDIGGASKDTESQVSQGSTDGAGKCHDKKSGITLAVTESSKAGKSNKSSSERRDGKCSDCSPASDIGVDGCCVVPLSSLRPLVGKVSPILRQLKISLLDMDAALPKVALRPSKAPSDRRQAWRSFVKSAETIYEMIQATITLEDMIKTEYLRNDWWYWSSFSAAAKSSALPSLALRIYSLDSAIIYEKMLNSSFADSSEPSAVAEQKPLITVDAEKLKASRKSSRKRKEPDG* 2211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2600 2210 ProSiteProfiles Zinc finger PHD-type profile. 81 133 IPR019787 -
Dod02g2600 2210 SUPERFAMILY FYVE/PHD zinc finger 48 131 IPR011011 -
Dod02g2600 2210 SUPERFAMILY FYVE/PHD zinc finger 1266 1329 IPR011011 -
Dod02g2600 2210 Pfam Methyl-CpG binding domain 239 292 IPR001739 GO:0003677
Dod02g2600 2210 Gene3D - 1121 1242 IPR036427 GO:0005515
Dod02g2600 2210 MobiDBLite consensus disorder prediction 1982 2038 - -
Dod02g2600 2210 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 137 IPR013083 -
Dod02g2600 2210 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 22 2210 - -
Dod02g2600 2210 SUPERFAMILY Bromodomain 1114 1234 IPR036427 GO:0005515
Dod02g2600 2210 MobiDBLite consensus disorder prediction 1870 1897 - -
Dod02g2600 2210 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 238 309 IPR001739 GO:0003677
Dod02g2600 2210 MobiDBLite consensus disorder prediction 1 27 - -
Dod02g2600 2210 ProSitePatterns Zinc finger PHD-type signature. 84 130 IPR019786 -
Dod02g2600 2210 Pfam PHD-finger 84 131 IPR019787 -
Dod02g2600 2210 Pfam PHD-finger 1279 1325 IPR019787 -
Dod02g2600 2210 PANTHER OS02G0192300 PROTEIN 22 2210 - -
Dod02g2600 2210 MobiDBLite consensus disorder prediction 1759 1781 - -
Dod02g2600 2210 CDD PHD1_Lid2p_like 1279 1324 - -
Dod02g2600 2210 MobiDBLite consensus disorder prediction 1541 1577 - -
Dod02g2600 2210 SMART PHD_3 1279 1325 IPR001965 -
Dod02g2600 2210 SMART PHD_3 83 131 IPR001965 -
Dod02g2600 2210 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1279 1326 IPR013083 -
Dod02g2600 2210 MobiDBLite consensus disorder prediction 1883 1897 - -
Dod02g2600 2210 ProSiteProfiles FYR domain FYRN motif profile. 381 434 IPR003888 GO:0005634
Dod02g2600 2210 ProSitePatterns Zinc finger PHD-type signature. 1280 1324 IPR019786 -
Dod02g2600 2210 Gene3D - 382 489 - -
Dod02g2600 2210 ProSiteProfiles FYR domain FYRC motif profile. 539 682 IPR003889 GO:0005634
Dod02g2600 2210 CDD Bromodomain 1125 1232 - -
Dod02g2600 2210 SUPERFAMILY DNA-binding domain 240 293 IPR016177 GO:0003677
Dod02g2600 2210 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1359 1403 IPR028942 -
Dod02g2600 2210 MobiDBLite consensus disorder prediction 2023 2037 - -
Dod02g2600 2210 ProSiteProfiles Zinc finger PHD-type profile. 1277 1327 IPR019787 -
Dod02g2600 2210 MobiDBLite consensus disorder prediction 1012 1033 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2600 3 2210 C2H2 Transcription Factor Family AT3G01460 44.785 0.0 1726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Dod02g2600 MBD 2.1e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2600 K22768 - gmx:100791814 3164.01