Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2586 ATGTCACAACAACAGCAGCAACAAGAACAGGGGCACGCGATCGAGCTGTACTTAGACCCAGCACTGGAGAACCAGGTGCTGAAAGCGTGGAACGTGCTGGCACGCAGGCAAATCAGCACTCACCTCATCGAGATGGAGTCACGCCCTCACATCACTCTCTTCTCCTTCTCCTCCTCCTCCTTCGACCCTTCCAAGGTCGAGTCCCTCGTCAAGTCCTTCGCCGCAAGACACGACCCTCTCCCTCTCTCCTTCTCCGCCGTCGGCACCCTCCCCGGCGACTCCAACCTCCTCTTCCTCTCCCCCACCCCTACCCTCTCCCTCCTCCAGTTCCACTCCCACCTCTGCGACGCCCTCCGAAAGGAAGGCGTCGACGTCGCCGCCGACTATTCCTTCGATTCTTGGATCCCTTTCTGCCCCGTCGCTCAGCAGGTTCCCAAGGCCAGGATGGCTGAGGCTTTCTGCGTCCTCAGGGACTTGAAATTGCCGGTTACCGGTTACGCTGTTGACATTGGTCTCGTCGAGTTCTCGCCGGTTCGGGAGCTCTTCTCGTTCGTGCTTGGCAATGCCGTGGAATCATGA 579 0.5924 MSQQQQQQEQGHAIELYLDPALENQVLKAWNVLARRQISTHLIEMESRPHITLFSFSSSSFDPSKVESLVKSFAARHDPLPLSFSAVGTLPGDSNLLFLSPTPTLSLLQFHSHLCDALRKEGVDVAADYSFDSWIPFCPVAQQVPKARMAEAFCVLRDLKLPVTGYAVDIGLVEFSPVRELFSFVLGNAVES* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2586 192 Gene3D Cyclic phosphodiesterase 13 187 - -
Dod02g2586 192 Pfam 2'-5' RNA ligase superfamily 48 172 - -
Dod02g2586 192 PANTHER - 10 191 - -
Dod02g2586 192 SUPERFAMILY LigT-like 12 161 IPR009097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2586 Dod-Chr2 57169511 57170089 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2586 10 192 Calmodulin-binding Proteins AT5G40190 66.667 1.91e-86 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2586 - - mnt:21391761 280.796