Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2585 ATGTCACAGCAGCAGCAGCAAGAAGAGGGGTACGCGATCGAGCTGTACTTGGACCCAGCACTGGAGAACCAGGTGCTGAAAGCGTGGAACGTGCTGGCACGCAGGCAAATCAGCACTCACCTCATCGAGATGGAGTCACGCCCTCACATCACTCTCTTCTCCTTCTCCTCCTCCTCCTCCTTCGACCCTTCCAAGGTCGAGTCCCTCGTCAAGTCCTTCGCCGCAAGACACGACCCTCTCCCTCTCTCCTTCTCCGCCGTCGGCACCCTCCCCGGCGACTCCAACCTCCTCTTCCTCTCCCCCACCCCTACCCTCTCCCTCCTCCAGTTCCACTCCCACCTCTGCGACGCCCTCCGAAAGGAAGGCGTCGACGTTGCCGCCGACTATTCCTTCGATTCTTGGATCCCTTTCTGCCCCGTCGCTCAGCAGGTTCCCAAGGCCAGGATGGCTGAGGCTTTCTGCGTCCTCAGGGACTTGAAATTGCCGGTTACCGGTTACGCTGTTGACATCGGCCTCGTCGAGTTCTCGCCGGTCCGGGAGCTCTTCTCGTTCGGGCTTGGCAATGCCGTGGAATCGTGA 579 0.6045 MSQQQQQEEGYAIELYLDPALENQVLKAWNVLARRQISTHLIEMESRPHITLFSFSSSSSFDPSKVESLVKSFAARHDPLPLSFSAVGTLPGDSNLLFLSPTPTLSLLQFHSHLCDALRKEGVDVAADYSFDSWIPFCPVAQQVPKARMAEAFCVLRDLKLPVTGYAVDIGLVEFSPVRELFSFGLGNAVES* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2585 192 Gene3D Cyclic phosphodiesterase 10 187 - -
Dod02g2585 192 Pfam 2'-5' RNA ligase superfamily 47 172 - -
Dod02g2585 192 PANTHER - 9 191 - -
Dod02g2585 192 SUPERFAMILY LigT-like 9 161 IPR009097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2585 Dod-Chr2 57161015 57161593 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2585 9 192 Calmodulin-binding Proteins AT5G40190 67.391 2.58e-87 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2585 - - mnt:21391761 278.485