Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2583 ATGCATGGGTCCGGTCGTGAGAAGTGGAAACAGAGCCGGCACATGTGGCCTGTACCTTCCAACGCCACCGCTGTAGCCCCCGATTCTTCACCGTCTGAATTTATATGCAAAGATGGACGCAAGATTCGTGTTGGTGATTGTGCACTTTTCAAGCCACCCCGGGATTCCCCTCCTTTTGTTGGAATAATTCGCAAGATAATATTTAATAAAGAAGAAAGTCCTAGTTTAGAAGTGAATTGGCTTTATCGACCTGCTGATTTGAAGCTTTCCAAAGGCAACACATTGGAAGCTGCGCCTAACGAAATCTTCTACTCCTTTCATAAGGATGAAAAAATATCTGCTGCATCATTACTCCATCCGTGTAAAGTCGCGTTCCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCTGCGTTTGTCTGTAGACGAGTGTATGACATTGAGAACAATTGTTTATGGTGGCTAACTGATAAGGACTACATTAATGAACGACAGGAAGAAGTTGACCAGTTATTAGACAAGACAAAACTAGAAATGCATGGGGCAGCGCAGTCAGGAGGCCGATCTCCAAAACCCTTGAATGGTCCAACATCAACACAATCATTGAAATCTGGTTCTGATAGTGTTCAAAATAGTTCTTCCTTTGGTGCACAGGTTAAGGGTAAAAAGAGAGAACGGGGTGATCAGGGATCTGATTCATCTAAAAGGGAGCGGTTATTAAAATCAGAAGATGGGGATTCTGGTCAATGTAAACCTGAGAGCATGTTGAAGTCTGAGATTGCTAAAATTACTGATAAAGGTGGGCTTGTGGACTTTGAAGGAGTTGAAAGATTGGTACAGCTCATGCAACCAGACAGCACTGATAAGAAAATAGATTTGGCTGGGCGAATAATGCTTGTGGATGTAATAGCAGTTACAGACCGGTATGACTGTCTTGTCCGGTTTGTACAGCTCAGGGGTTTGCCTGTGTTGGATGAATGGCTCCAAGAGGTCCATAAGGGCAAAATTGGTGATAGTAATATGCATAAAGAAAGTGACAAGTCCGTTGAGGAATTTTTGTTAGCCTTACTTCGTGCCTTGGATAAGCTTCCTGTAAACCTTCATGCGTTACAAACCTGTAATGTTGGGAAGTCAGTTAATCATTTACGCAGTCACAAAAATTTGGAAATTCAGAGGAAAGCTAGGAGTTTAGTAGACACATGGAAGAAACGTGTTGAGGCTGAAATGAATATGACTGATTCAAAACCTGGTTCTACCCGTGCTGTTTCTTGGCAAGCAAAGCCAGCATCTTCTGAGGTCTCTCATGTTGGAAATAAGAAAACAGGTGGATCTGAGAATGTAGCAAAAAGTTCTGTAGTTCAACCCTCAGTATCTAAAAATTCCCTGGCTAAGCATGGTTCTGGAGAGGCATTGTCCAAGTCCTCTTCATCTCCGGGCTCAACCAAATCGATTACTACCTCATTGGGAAGCAACTCAAAAGATCACAATGTGAAAGTGCTGGTTGGAGCTGCTGCAGCATCAGATCAACCACTGACACCTATCAAGGAGGAAAAGAGCAGCAGTTCTAGTCAGTCCCAAAACAACAGCTTATCTTGTTCTAGTGAACATGCCAAAACTGTTGGTTCTTGTCGGGAAGATGCAAGGAGCTCCACAGCTGTGTCAGTGAGTGTGAGCAAAATTCCAGGCGGTGCATCTCGAACGCGGAAGTCTAGCAATGGTCTACATGGGGCAGGTGTTGCTCTTGTTCAGAAGGAGCCCATATCTGCAAAAAGTTCAAGTAGAAATTCCCCTTCGGAGAAGGTTTCGCCGACTCGGGTATCCCAAGAAAAATCTCCTGATCAGCCCCTTGCCGAACAAGGGAATAATCAGCGCCTGATTCTCAAGCTGCCAAACACTGGTCGCAGTCCTTCGAGGGTAGCTGGCACTGGTTCTTTTGAAGAACCTGCTGTTCCTTGTGGCAAAGCTTCATCTCCTGCTGACAAGAATGACAATCAGGATAGAAGAGTTAAAGCTAAGAGTGATTGTTTGCAGACCAATGTTTCGTCAAATATGATAACTGATGCATGTGTTGCTAATGAAGTTTGTGAGGAAGGTAAGGGCTCTCCAATGGGTGATGAACGGGGAAGGGCTAGTGAAGATGGCGATAAAGTGGTAGAAACATCGAAACAAACAAATTCTTTATCAGGATTTATCTCCAGATCAGGGCAGACCTATGATGCTTCTTTAAGCCCTATGAATGCATTAGTTGAAAGCTGCGTGAAATTTTCTGAAGCAAGTGCCTCTGTGTCTCCTGGAGATGATGGGATGAACTTACTTGCTACTGTAGCTGCAGGAGAAATTTCCAGATCTGAAAATGTCTCACCGCTAGCTTCACCTGAGAGGAAGTCTCCTGCAGCAGAGGAATCAAGTTCTGGCAATGTTTGCAATGCTAGACATTCTGCCGAAACAGCTGTTCGCACTGTTGCACAATCTGATGGGGGGGCATCTGGAGAGCATCAGTTGAATACTGTTGATTCAATTCAAGTTAAGAATGATTCAAGGCATCCTGTTACGACAATATTGCATGAATTTTCTGCAGATGAAGCCATTCCATCCAGCTGTACAGAGAAAACTGGTGATGACAGAACTCAGATGAATATTTCGACTACAGATTTGTCACAGAATGCTGAAGCTCCATGCTTACGGCCTGAAACCAAGGAGGGTGCTTCTGAAACTGTTCTACCAGCTAAAAAAGAGGCTCAGGCAGATACTGGAGGTGATAACCATTTGCATGAGCAGAGGCAATTGGGAAGTCAGTCGGCTAAAAGTGGTGGTTTGGACTCTAAATTAAAGTCAAGGGCTTCCTCTTCAGATGAAGAGCAGAAGATTGATCACTTAGATGAGGGAATCCTGGAGAATGAGAAAATGTTAGTTTCGAAAGATGCTGTTGCAAGTGTGAAGATTGAAAAGGAAGCTGGTGAAAAATTACCTGAGTTGTCTTCAGATGCTGGTAATGATAACAAGATTAGTGCAGAGCAAGTGGCCAGTACTGGTATATCAGTGCCAAAGTCCTCTTCAGTTGCAGAAAACTGTGAGTCTGTAGATTTAAAAAAGGAGGATGTTATACCGCCTTCTGCTCCTGGTAATGCTTTGATTGTATCCAGGGACGAAAAGGCCGATGAGATGAAGTCAGATGTGTTTGAGCCTGATGAAAAACAGATGGATATCGATTCAGCTGTTTCGGCTGGTGTTAATCGACGTGATGAAGAGGAGTTGGGTAGAAAAGAAGTTCTTGGTCACTGTTCTGGCTCATCAGATCGCACAGAGCTGCGCACAATTTCTGGGAAGGAGAATGAAGCATCCAAAGCTTCTGAGTGTAACTTAGATGGAAATGAATCTGATATTAAAGGAGAGCGGCATGCTTGCAGTAATCCACCCCTCACTGCTGCTGGGTCTGATGCAGCCGTAAAACTGGATTTTGATTTAAATGAGGGCTTTCCGGTTGATGATGCAGGCCAGGGGGAGATTGTTAGGCAGGAAGAAAATATCACATCATCTGCAGTCCACAATCCGAGTCCATTGCCTTTTCCCATTTCATCCATGTCTGGGGGCTTCCATGCTTCTATTACGGTGGCATCTGCTGCCAAAGGGCCAGTTGTTCTCCCAGAAAACCCATTGCGGAGTAAGGGGGAACTTGGATGGAAAGGCTCAGCTGCTACTAGTGCCTTCCGGCCAGCTGAACCTAGGAAAAATCCTGACATACCATCAAATATTAATGATATTCCTTCTGTTGATTCCACTTCTATAAAACAAGGTCGCCCTCCTCTAGATTTTGATTTAAATGTTGCCGATGAAATAAGTTTTGAGGATGTAGGTTCCCATGGTTCTTTAGAATCTGGGCCACCTGATCGTAGCACAGTGGGACTTGATCTTGATTTAAACAGAGTTGATGAGACTCCTGAAGCCGGGTCTTTCTCTTTGAGTAAACAGGATATTCCTTCTTTGCCATGTAAGCCTTCTCTGTCCAGTGGGTTGTCTAATGGTGGAAGTGTCTCAAGAGACTTTGATTTGAATAATGGGCCAGGCCTTGAGGAAGTTGGGACTGAAGTCCCAGCTCGTAGTCAGCAGATCAAAAGTACTATGCCATTTCCATCTGCTATTCATGGTGCAAGAGCCAACAATGCTGAATTTGGGAATTATTCGTCATGGTTTCCTCCAGGAAGTTCTTATTCTGCAATTACTGTCCCACCACTTCTTCCCGGTAGAGGGGAGCAGAGTTATGTTGCTGCTGCTGGGGCACAGAGGATCATGGGTCCTACAGGAAGCACACCATTTGGTCCTGAAATCTTCCGTCCAGTCCTCTCATCCTCTCCAGCTGTTGCTTACCAACCTACTGTGCCCTTTCCATATCCAGGATTTCCTTTTGAGACCAGTTTTCCTTTATCGTCAAACCCCTTTTCTGTTGGTTCAACAGCTTTTATGGATTCGTCCACAGTTAGTGGACTTTGCTTTCCTACCATGCCCTCGCAGCCAGTTGGGCCCGGTGGTGTTGTCTCATCAACCTATCCCCGATCCTATGTTATGAGTCTTCCTGGTGGTACAAGTAATGTGATTCCTGACAGCAGAAAATGGGGAAGTCAAAGTCTGGATCTTAATTCAGGCCCTGGAGGTACAGATACTGAAAGGAGAGACGATAGATTGCCTTCGGGATTGAGGCAAGTGCCTGTACCCAAGTCGCAACCCTTGATGGAGGAACATATGATGTTTCCGGTGGCAGGTGTATTGAAGAGAAAGGAACCTGATGGTAGTTGGGATGGAGCTGATAGATTCAGCTACAAACAGCACTCATGGCAGTAG 4836 0.4475 MHGSGREKWKQSRHMWPVPSNATAVAPDSSPSEFICKDGRKIRVGDCALFKPPRDSPPFVGIIRKIIFNKEESPSLEVNWLYRPADLKLSKGNTLEAAPNEIFYSFHKDEKISAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIENNCLWWLTDKDYINERQEEVDQLLDKTKLEMHGAAQSGGRSPKPLNGPTSTQSLKSGSDSVQNSSSFGAQVKGKKRERGDQGSDSSKRERLLKSEDGDSGQCKPESMLKSEIAKITDKGGLVDFEGVERLVQLMQPDSTDKKIDLAGRIMLVDVIAVTDRYDCLVRFVQLRGLPVLDEWLQEVHKGKIGDSNMHKESDKSVEEFLLALLRALDKLPVNLHALQTCNVGKSVNHLRSHKNLEIQRKARSLVDTWKKRVEAEMNMTDSKPGSTRAVSWQAKPASSEVSHVGNKKTGGSENVAKSSVVQPSVSKNSLAKHGSGEALSKSSSSPGSTKSITTSLGSNSKDHNVKVLVGAAAASDQPLTPIKEEKSSSSSQSQNNSLSCSSEHAKTVGSCREDARSSTAVSVSVSKIPGGASRTRKSSNGLHGAGVALVQKEPISAKSSSRNSPSEKVSPTRVSQEKSPDQPLAEQGNNQRLILKLPNTGRSPSRVAGTGSFEEPAVPCGKASSPADKNDNQDRRVKAKSDCLQTNVSSNMITDACVANEVCEEGKGSPMGDERGRASEDGDKVVETSKQTNSLSGFISRSGQTYDASLSPMNALVESCVKFSEASASVSPGDDGMNLLATVAAGEISRSENVSPLASPERKSPAAEESSSGNVCNARHSAETAVRTVAQSDGGASGEHQLNTVDSIQVKNDSRHPVTTILHEFSADEAIPSSCTEKTGDDRTQMNISTTDLSQNAEAPCLRPETKEGASETVLPAKKEAQADTGGDNHLHEQRQLGSQSAKSGGLDSKLKSRASSSDEEQKIDHLDEGILENEKMLVSKDAVASVKIEKEAGEKLPELSSDAGNDNKISAEQVASTGISVPKSSSVAENCESVDLKKEDVIPPSAPGNALIVSRDEKADEMKSDVFEPDEKQMDIDSAVSAGVNRRDEEELGRKEVLGHCSGSSDRTELRTISGKENEASKASECNLDGNESDIKGERHACSNPPLTAAGSDAAVKLDFDLNEGFPVDDAGQGEIVRQEENITSSAVHNPSPLPFPISSMSGGFHASITVASAAKGPVVLPENPLRSKGELGWKGSAATSAFRPAEPRKNPDIPSNINDIPSVDSTSIKQGRPPLDFDLNVADEISFEDVGSHGSLESGPPDRSTVGLDLDLNRVDETPEAGSFSLSKQDIPSLPCKPSLSSGLSNGGSVSRDFDLNNGPGLEEVGTEVPARSQQIKSTMPFPSAIHGARANNAEFGNYSSWFPPGSSYSAITVPPLLPGRGEQSYVAAAGAQRIMGPTGSTPFGPEIFRPVLSSSPAVAYQPTVPFPYPGFPFETSFPLSSNPFSVGSTAFMDSSTVSGLCFPTMPSQPVGPGGVVSSTYPRSYVMSLPGGTSNVIPDSRKWGSQSLDLNSGPGGTDTERRDDRLPSGLRQVPVPKSQPLMEEHMMFPVAGVLKRKEPDGSWDGADRFSYKQHSWQ* 1612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2583 1611 MobiDBLite consensus disorder prediction 1223 1269 - -
Dod02g2583 1611 MobiDBLite consensus disorder prediction 1591 1611 - -
Dod02g2583 1611 PANTHER BAH DOMAIN-CONTAINING PROTEIN 1 1611 - -
Dod02g2583 1611 Pfam BAH domain 41 148 IPR001025 GO:0003682
Dod02g2583 1611 MobiDBLite consensus disorder prediction 699 719 - -
Dod02g2583 1611 Pfam TFIIS helical bundle-like domain 356 405 IPR017923 -
Dod02g2583 1611 Gene3D - 24 263 IPR043151 -
Dod02g2583 1611 MobiDBLite consensus disorder prediction 782 812 - -
Dod02g2583 1611 MobiDBLite consensus disorder prediction 412 492 - -
Dod02g2583 1611 MobiDBLite consensus disorder prediction 1249 1263 - -
Dod02g2583 1611 MobiDBLite consensus disorder prediction 1075 1095 - -
Dod02g2583 1611 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 273 409 IPR035441 -
Dod02g2583 1611 MobiDBLite consensus disorder prediction 1531 1548 - -
Dod02g2583 1611 MobiDBLite consensus disorder prediction 1531 1571 - -
Dod02g2583 1611 MobiDBLite consensus disorder prediction 945 966 - -
Dod02g2583 1611 MobiDBLite consensus disorder prediction 924 944 - -
Dod02g2583 1611 MobiDBLite consensus disorder prediction 797 812 - -
Dod02g2583 1611 ProSiteProfiles BAH domain profile. 40 156 IPR001025 GO:0003682
Dod02g2583 1611 SMART TFS2_5 328 407 IPR003617 GO:0005634
Dod02g2583 1611 MobiDBLite consensus disorder prediction 408 492 - -
Dod02g2583 1611 MobiDBLite consensus disorder prediction 190 218 - -
Dod02g2583 1611 MobiDBLite consensus disorder prediction 219 250 - -
Dod02g2583 1611 ProSiteProfiles TFIIS N-terminal domain profile. 322 408 IPR017923 -
Dod02g2583 1611 CDD TFIIS_I 343 406 - -
Dod02g2583 1611 SMART BAH_4 40 156 IPR001025 GO:0003682
Dod02g2583 1611 MobiDBLite consensus disorder prediction 697 723 - -
Dod02g2583 1611 MobiDBLite consensus disorder prediction 1047 1068 - -
Dod02g2583 1611 MobiDBLite consensus disorder prediction 513 572 - -
Dod02g2583 1611 MobiDBLite consensus disorder prediction 1031 1120 - -
Dod02g2583 1611 MobiDBLite consensus disorder prediction 586 639 - -
Dod02g2583 1611 MobiDBLite consensus disorder prediction 881 966 - -
Dod02g2583 1611 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1611 - -
Dod02g2583 1611 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 310 418 IPR035441 -
Dod02g2583 1611 MobiDBLite consensus disorder prediction 179 253 - -
Dod02g2583 1611 MobiDBLite consensus disorder prediction 508 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2583 Dod-Chr2 57144850 57152869 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Dod02g2583 BAH 1.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2583 - - ahf:112750750 2399.39