Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2563 ATGGATAGCTTGGAGAAGGTTGTTGCTGTGATTATGGTGGGTGGACCCACCAAAGGGACCAGATTTCGGCCTCTTTCATTCAACGCTCCAAAACCCCTTTTCCCTTTGGCTGGCCAGCCAATGGTTCATCATCCAATTTCAGCCTGTAAAAGGATACCCAATTTGGCTCAAATATATCTGATTGGATTCTATGAGGAGCGAGAATTCGCTCTATATGTCTCTTCAATTTCGAATGAGCTGAAATTACCAGTAAGATATTTGAAGGAAGATAAACCACATGGTTCAGCAGGAGGTCTTTACTACTTCAGAGATATTATCATGGAAGACAGCCCATCACATATCTTTTTGCTAAATTGTGATGTTTGCTGCAGTTTCCCGCTACCATCCATGCTTGAAGCCCATAAAAAGTATGGTGGTATGGGGACAATGTTGGTAATCAAGGTTTCTGCTGAATCAGCCAGCCAGTTCGGTGAGTTAGTTGCTGATCCAACAACCAATGAATTGCTGCATTATACTGAGAAACCTGAGACTTTTGTTAGTGATTTGATAAATTGTGGAGTCTACATTTTCACCCCTGATATTTTTTCTGCCATCCAAGATGTATCTATGAATCGAGAAGGCAGAGCTAATCTACGCCGTGTTTCCAGCTTTGAAGCTCTCCAGTCTGCCACAAGGACCACTCCTACAGATTTTGTAAGACTGGATCAAGATATATTGTCACCTCTAGCTGGAAAGAAGCAACTGTATACATATGAGACAAAGGATTTCTGGGAGCAAATCAAAACTCCAGGAATGTCCTTGAAATGCTCAGAGTTGTATCTTGCTCAATATCGGCATACTTCACCCCATCTTTTGTCCAGTGGAGATGGTAAAAAGATTGCAACAATTGTTGGTGATGTGTATATTCACCCATCAGCGAAAGTTCATCCATCTGCAAAGATTGGTCCCAATGTTTCTATCTCAGCAAATGTTCGTGTTGGTTCTGGTGCCAGGTTAATCAGTTGTATCATCTTGGACGATGTTGAAATTAAGGAAAATGCCGTAGTTATAAATTCTATTGTTGGATGGAAGTCATCAATCGGAAGATGGTCACGGGCACAGGCTGATGGTGACTACAATGCAAAGCTTGGCATAACCATCCTAGGAGAAGCTGTGACTGTGGAAGATGAGGTGGTGGTGATCAACAGCATTGTTCTTCCCAATAAGACTCTTAATGTCAGTGTGCAAGAAGAAATCATCTTGTAA 1245 0.4185 MDSLEKVVAVIMVGGPTKGTRFRPLSFNAPKPLFPLAGQPMVHHPISACKRIPNLAQIYLIGFYEEREFALYVSSISNELKLPVRYLKEDKPHGSAGGLYYFRDIIMEDSPSHIFLLNCDVCCSFPLPSMLEAHKKYGGMGTMLVIKVSAESASQFGELVADPTTNELLHYTEKPETFVSDLINCGVYIFTPDIFSAIQDVSMNREGRANLRRVSSFEALQSATRTTPTDFVRLDQDILSPLAGKKQLYTYETKDFWEQIKTPGMSLKCSELYLAQYRHTSPHLLSSGDGKKIATIVGDVYIHPSAKVHPSAKIGPNVSISANVRVGSGARLISCIILDDVEIKENAVVINSIVGWKSSIGRWSRAQADGDYNAKLGITILGEAVTVEDEVVVINSIVLPNKTLNVSVQEEIIL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2563 414 CDD M1P_guanylylT_A_like_N 9 273 - -
Dod02g2563 414 Pfam Nucleotidyl transferase 9 210 IPR005835 GO:0009058|GO:0016779
Dod02g2563 414 SUPERFAMILY Nucleotide-diphospho-sugar transferases 7 356 IPR029044 -
Dod02g2563 414 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 5 414 - -
Dod02g2563 414 Gene3D Hexapeptide repeat proteins 285 411 - -
Dod02g2563 414 PANTHER ADP-GLUCOSE PYROPHOSPHORYLASE FAMILY PROTEIN 5 414 - -
Dod02g2563 414 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 8 278 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2563 Dod-Chr2 56674634 56683659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2563 19 200 Eukaryotic Initiation Factors Gene Family AT2G34970 23.394 3.10e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2563 K00966 - mnt:21393802 759.985