Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2549 ATGGATCCCGCCACCATGACCATGACCATGACCATGACCATGGTGCTCCTCTCCCTCCTCTTCCTCTCTCCCTTGGTCTCCTCGCAGGCTGTCGAAGACGACATCCAGTGCCTGAAGGGCATCAAGCAAAGCCTCGTCGACCCGCAGCAACGCCTCGCCTCCTGGGACTTCGAGAACAAAACGGTCGGGTTCATCTGCGGCTTCGTCGGCGTTGAGTGCTGGAACCTCCGCGAGAATCGCGTCCTCTCCCTCGACCTCGAAGGCATGAAGCTCTCCGGCCGCATCCCGGAATCCCTCAAGTTCTGCGGCAAGAACCTCCAGCGCCTGAATCTCGGCTCAAACTCCCTCTCCTCCGAGATCCCGCACGAGATCTGCACGTGGATGCAGTTCCTCGTCTCCCTTGACCTCTCCTACAACCAACTCACCGGCTCGATCCCTTCAACACTCTCCAACTGCTCATACCTCAACGAACTCGTTCTCTCCAATAACCAGCTCTCCGGGACCATACCTTACCAGCTAGGCTCCCTGACCAGGCTCAAGAAGTTCTCAGTCTCTAATAACCGTCTCACCGGAACCGTCCCTAGCTTCTTCAACGGTTTTGATAAGGCGGATTTCGACGGCAACAGCGGGTTGTGTGGCGGTCCGCTCGGATCCAAGTGTGGTGGCATGAGCAAGAAGAATCTTGCTATTATTGTTGCCGCTGGTATCTTCGGTGCTGCTGCTTCGTTGCTTCTTGCGTTTGGGTTGTGGTGGTGGTACCATTTGAGGCTTAGTGGTGGGAGGAAGAAGGGGAGGTTTGGTGGTGGTGGTGGTGGTGATGATTGGGTTCTGAGGTTGAGAGGGCATAAGCTTGTTCAGGTCACGCTTTTTCAGAAGCCGATTGTGAAGGTGAAGTTGGGGGATTTGATGGCTGCTACGAATAATTTCAGTGCTGAGAATGTTTTGATCTCGACGAGGACTGGGACCACTTATAAGGCGGATCTTCCGGATGGTTCGGCGTTGGCGGTTAAGCGGTTGAGTACTTGTAAGATTGGGGAGAAGCAGTTTAGGATGGAGATGAATCGACTGGGGCAGGTTAGGCACCCGAATTTGGCGCCTTTGTTGGGTTTTTGTGTTGTTGAAGATGAGAAGTTATTGGTTTATAAGCATATGTCGAATGGGACTCTGTATTCCTTGCTGCACAAGAATAATAATGGTGGGTTTTTGGATTGGGGTATGAGGTTTAGGATTGGATTGGGGGCCGCGAGGGGGCTTGCTTGGCTGCACCATGGCTGCCACCCGCCGATTATTCAGCAGAATATCTGCTCCAATGTGATACTTGTGGACGAGGATTTCGATGCTAGGTTGATGGATTTTGGGCTTGCTAGGCTTATGACCTCGGATTCTAATGGTAGCTTTGTGAATGGGGATTTGGGGGAGCTTGGGTATATTGCGCCGGAGTACTCGAGCACCTTGGTTGCTTCATTGAAAGGGGATGTGTATGGGTTTGGCGTGTTGCTTTTGGAGCTGGTTACAGGGCGAAAGCCTCTTGAGGTGAGCAATGGGGAGGAGGAGTTTAAGGGGAACTTGGTGGATTGGGTGACTATTCATTCGAGTTCGGGTAGGATCAAGGACTGCATTGATAAGGCCATAGCTGGAACGAGGCATGATGAGGAGATCCTGCAGTTCCTGAAAATTGCGTTGAATTGTGTTGTTACTCGCCCCAAGGATAGGTGGTCTATGTATCAGGTTTATCAGTCGTTGAAGAGTTTATGCAAAGACCATAGCTTCTTTGAACATGACGATGAATTCCCCTTGATCTTTGGTAAGCCGGAAAACGAGCCGGCATAG 1830 0.5186 MDPATMTMTMTMTMVLLSLLFLSPLVSSQAVEDDIQCLKGIKQSLVDPQQRLASWDFENKTVGFICGFVGVECWNLRENRVLSLDLEGMKLSGRIPESLKFCGKNLQRLNLGSNSLSSEIPHEICTWMQFLVSLDLSYNQLTGSIPSTLSNCSYLNELVLSNNQLSGTIPYQLGSLTRLKKFSVSNNRLTGTVPSFFNGFDKADFDGNSGLCGGPLGSKCGGMSKKNLAIIVAAGIFGAAASLLLAFGLWWWYHLRLSGGRKKGRFGGGGGGDDWVLRLRGHKLVQVTLFQKPIVKVKLGDLMAATNNFSAENVLISTRTGTTYKADLPDGSALAVKRLSTCKIGEKQFRMEMNRLGQVRHPNLAPLLGFCVVEDEKLLVYKHMSNGTLYSLLHKNNNGGFLDWGMRFRIGLGAARGLAWLHHGCHPPIIQQNICSNVILVDEDFDARLMDFGLARLMTSDSNGSFVNGDLGELGYIAPEYSSTLVASLKGDVYGFGVLLLELVTGRKPLEVSNGEEEFKGNLVDWVTIHSSSGRIKDCIDKAIAGTRHDEEILQFLKIALNCVVTRPKDRWSMYQVYQSLKSLCKDHSFFEHDDEFPLIFGKPENEPA* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2549 609 Pfam Leucine Rich Repeat 105 124 IPR001611 GO:0005515
Dod02g2549 609 Pfam Protein kinase domain 321 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2549 609 Gene3D Ribonuclease Inhibitor 31 222 IPR032675 -
Dod02g2549 609 CDD STKc_IRAK 317 584 - -
Dod02g2549 609 SUPERFAMILY L domain-like 30 208 - -
Dod02g2549 609 Pfam Leucine rich repeat 131 189 IPR001611 GO:0005515
Dod02g2549 609 Gene3D Phosphorylase Kinase; domain 1 271 383 - -
Dod02g2549 609 ProSiteProfiles Protein kinase domain profile. 309 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g2549 609 SUPERFAMILY Protein kinase-like (PK-like) 286 581 IPR011009 -
Dod02g2549 609 Pfam Leucine rich repeat N-terminal domain 32 74 IPR013210 -
Dod02g2549 609 PANTHER - 13 602 - -
Dod02g2549 609 Gene3D Transferase(Phosphotransferase) domain 1 384 600 - -
Dod02g2549 609 PANTHER OS07G0107800 PROTEIN-RELATED 13 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2549 Dod-Chr2 56419581 56421410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2549 16 607 Receptor kinase-like Gene Family AT3G28450 63.378 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Dod02g2549 Pkinase 2.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2549 - - gmx:100810378 944.11