Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2541 ATGGAGTTTGGGTTTGGGAAGATGTGGTCATACCTAGGCTCAATAACAGCTAGCATTATGTTTGTGTACACCATGTATGAGCGGTTCTTCCCACCCCATCTTCGTTCCTATGTTCGCAAATACACATACAAAATCACAAGCCTAATCTCCCCTTACATCCATATCACCTTCCCCGATTCCTCAGGTGAGAAACTCAAGCGCTGTGAGGCTTACACAAACATCCAGACCTACCTTAGTGCTAACTCATCCCAGAGTGCCAGAAGGCTCAAAGCTGAAGTCGTCAAAGATAGCCAAACCCCGCTAGTCCTTAGCATGGATGACGGTGAAGAGATCACTGATGAGTTCAAAGGGGTCAAAGTCTGGTGGTTCTCACACCACAAAACACGAAATTCACAATCATTTTCAATTTACCCTGCTTCGGATGAGAATAGGTACTTAACTCTTACCTTCCACAGGCGCCACCGTGACCTCATCACTGGCTCATACATCAACTATGTATTGGAAGAAGGAAAAGCCATTTCAACAAGAAACAGGCAGCTGAAGCTGTACACCAACAATCCCAGCAAGGATTGGCACTGGTACAGAAGCACCAAGTGGAGCCACATAGCTTTTGAGCACCCTGCAAGGTTCGAGACCTTGGCAATGGATCCGAAGAAGAAGGAAGAGATCATAGACGACCTTGTCAAGTTCAAGAATGGGAAAGACTACTATGAAAAAATTGGGAAGGCTTGGAAACGTGGGTATCTGCTATTTGGTCCACCTGGGACTGGGAAGTCATCAATGATAGCTGCCATGGCCAATTTCATGAACTATGATGTGTATGATCTTGAGTTGACAACTGTCAAGGAGAACGGTGAGTTAAAGAAGCTTTTCATTGACACAAGTAATAAATCAATCATCCTGATTGAAGACATTGATTGCTCCCTCGATCTTACTGGCCAGAGGAAGAAAAAGAAGGAGAAAGATGAGGATGAGAAAGCCGAGGATGCGATAAAGAAAGGAAAATTAGATGAAAAAGATGAGGGCAGCAAGGTGACTCTTTCTGGGCTGTTGAATTTCACTGATGGGATTTGGTCAGCATGTGGCGGGGAGAGGATCATAATTTTCACCACAAATTATGTGGACAAGCTTGATCCTGCTTTGATTAGGAGAGGAAGGATGGACAAGCACATAGAGATGTCCTATTGTAGGTTTGAAGCTTTTAAGGTGCTTGCAAAGAACTACTTGGATGTTGAGTCCCACAGTTTGTTCCCTATCATTGAGGAGAAGTTGGGGGAAACTGACACCTGCTGA 1293 0.4455 MEFGFGKMWSYLGSITASIMFVYTMYERFFPPHLRSYVRKYTYKITSLISPYIHITFPDSSGEKLKRCEAYTNIQTYLSANSSQSARRLKAEVVKDSQTPLVLSMDDGEEITDEFKGVKVWWFSHHKTRNSQSFSIYPASDENRYLTLTFHRRHRDLITGSYINYVLEEGKAISTRNRQLKLYTNNPSKDWHWYRSTKWSHIAFEHPARFETLAMDPKKKEEIIDDLVKFKNGKDYYEKIGKAWKRGYLLFGPPGTGKSSMIAAMANFMNYDVYDLELTTVKENGELKKLFIDTSNKSIILIEDIDCSLDLTGQRKKKKEKDEDEKAEDAIKKGKLDEKDEGSKVTLSGLLNFTDGIWSACGGERIIIFTTNYVDKLDPALIRRGRMDKHIEMSYCRFEAFKVLAKNYLDVESHSLFPIIEEKLGETDTC* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2541 430 CDD AAA 245 395 - -
Dod02g2541 430 Gene3D - 198 395 IPR027417 -
Dod02g2541 430 Pfam Domain associated at C-terminal with AAA 30 125 IPR025753 -
Dod02g2541 430 Pfam ATPase family associated with various cellular activities (AAA) 249 394 IPR003959 GO:0005524|GO:0016887
Dod02g2541 430 ProSitePatterns AAA-protein family signature. 365 384 IPR003960 GO:0005524|GO:0016887
Dod02g2541 430 SMART AAA_5 244 397 IPR003593 -
Dod02g2541 430 PANTHER BCS1 AAA-TYPE ATPASE 7 428 - -
Dod02g2541 430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 418 IPR027417 -
Dod02g2541 430 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 7 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2541 Dod-Chr2 56220122 56233531 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2541 219 393 Calmodulin-binding Proteins AT3G56690 26.776 4.60e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2541 - - pvu:PHAVU_004G024700g 622.468