Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2538 ATGGAGTATGGGTTTGGGACGATGTGGTCATACCTAGGCTCAATAACAGCTACCATTATGTTTGTGTACCCCATATATCAGCGATTCTTCCCACCCAATCTTCATTCCTATGTTCGAAAATACACATACAAATTCACAAGCCTAATCTACCCATACATCGACATCACCTTCTCCGAGTCCTCAGGTGAGAAACTCAAGCGCAGTGAGGCTTACACAAACATCCAAACCTACCTCAGTGCAAACACATCCCAAAGTGCCAGAAGGCTCAAAGCTGAAGTTGTCAAAGATAGCCAAACTCCACTTGTGCTTAGCATGGATGACGGTGAAGAGATCACTGATGAGTTCGAAGGGGTCAAAGTTTGGTGGTTCTCAAAGCACACAAAACGAGATTCACAATCAATTTCATTCTATCCTGCTCCGGATGAGAAGAAGTGCTTAATTCTGACCTTCCACAGGCGCCACCGTGACCTCATCACTGGCTCTTACATCATCCATGTGTTGGAACAAGGCAAGGCCATTTCAACAAGGAGCAGGCAGCTAAAGCTGCATACTAACAATCCCAGCAATGAATGGTATAGCTACAAAGGCTCCAAGTGGAGCCACATAACGTTTGAGCACCCTGCAAGGTTTGAGACCTTGGCAATGGATCCGACGAAGAAGGAAGAGATCATAAACGACCTTGTCAAGTTCAAGAATGGGAAAGACTACTATGAGAAGATTGGGAAGGCTTGGAAACGTGGGTACCTTCTATTTGGTCCGCCTGGGACTGGGAAGTCATCAATGATAGCTGCCATGGCCAATTTCATGAACTATGATGTGTATGATCTTGAGTTGACAACTGTCAAGGAGAACACTGAGCTAAAGAAGCTTTTCATTGACACAAGTAACAAGTCAATCATAGTGATTGAAGACATTGATTGCTCCCTTGATCTTACTGGCCAGAGGAAGAAGAAGAAGGAGAAAGATGAGGAAGAGAAAGCCAAGGATGCGATTAAGAAAGGAAAATTAGAAGAAACGGATGAGGGCAGCAAGGTGACTCTTTCTGGGCTGTTGAATTTCATTGATGGGATTTGGTCAGCATGTGGCGGGGAGAGGATCATAATTTTCACCACAAATTATGTGGACAAGCTTGATCCTGCTTTGATTAGGAGAGGAAGGATGGACAAGCACATAGAGATGTCCTATTGTAGGTTTGAAGCTTTTAAGGTGCTTGCCAAGAACTACTTGGATGTTGAGTCCCACAGTTTGTTCCCCATCATTGAGGAGAAGTTGGGAGAAACTGATATGACACCTGCTGATGTTGCTGAGAACCTGATGCCAAAGTCAACTACTGAAGATTCTGACACTTGCTTGCAGAATTTGGTTAAGTCTCTTGATGTGGCCAAGGAGGAGGCCAAGAGGAAGGCAGAGGAGGAAGAGGCTAAGTTGAAGGCGGAGAAAGAAAAAGAAGAGGTGGCTAAGGAGGAAGAAGTGAAAGCAAGTGAAGAAACCGGAGGTGTGGTGAAAGAGAATGGTGTTGTCCATTGA 1527 0.4479 MEYGFGTMWSYLGSITATIMFVYPIYQRFFPPNLHSYVRKYTYKFTSLIYPYIDITFSESSGEKLKRSEAYTNIQTYLSANTSQSARRLKAEVVKDSQTPLVLSMDDGEEITDEFEGVKVWWFSKHTKRDSQSISFYPAPDEKKCLILTFHRRHRDLITGSYIIHVLEQGKAISTRSRQLKLHTNNPSNEWYSYKGSKWSHITFEHPARFETLAMDPTKKEEIINDLVKFKNGKDYYEKIGKAWKRGYLLFGPPGTGKSSMIAAMANFMNYDVYDLELTTVKENTELKKLFIDTSNKSIIVIEDIDCSLDLTGQRKKKKEKDEEEKAKDAIKKGKLEETDEGSKVTLSGLLNFIDGIWSACGGERIIIFTTNYVDKLDPALIRRGRMDKHIEMSYCRFEAFKVLAKNYLDVESHSLFPIIEEKLGETDMTPADVAENLMPKSTTEDSDTCLQNLVKSLDVAKEEAKRKAEEEEAKLKAEKEKEEVAKEEEVKASEETGGVVKENGVVH* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2538 508 CDD AAA 245 395 - -
Dod02g2538 508 PANTHER BCS1 AAA-TYPE ATPASE 7 491 - -
Dod02g2538 508 MobiDBLite consensus disorder prediction 462 508 - -
Dod02g2538 508 SMART AAA_5 244 397 IPR003593 -
Dod02g2538 508 Pfam Domain associated at C-terminal with AAA 30 124 IPR025753 -
Dod02g2538 508 Coils Coil 451 497 - -
Dod02g2538 508 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 7 491 - -
Dod02g2538 508 Gene3D - 392 461 - -
Dod02g2538 508 MobiDBLite consensus disorder prediction 462 497 - -
Dod02g2538 508 Gene3D - 198 391 IPR027417 -
Dod02g2538 508 ProSitePatterns AAA-protein family signature. 365 384 IPR003960 GO:0005524|GO:0016887
Dod02g2538 508 Pfam ATPase family associated with various cellular activities (AAA) 249 394 IPR003959 GO:0005524|GO:0016887
Dod02g2538 508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 444 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2538 Dod-Chr2 56180823 56182720 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2538 218 393 Calmodulin-binding Proteins AT3G56690 27.717 1.03e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2538 - - pvu:PHAVU_004G024700g 661.373