Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2536 ATGCTAGGGGAGTTTTGGGCACAAATGAGGTCTTTAATGGCCACAACTGTGTATGTTTACACAGTTTTTCAGCGCTTTATCCCTCCTCAACTTCTTGACCGTCTTCAAGCCTACGCTAAAAAACTGACCAGCCATTTCTACCCTTACATCCATATCAAATTCCCTGAGTTCTCTGGTGAGAGACTCAAGCGCAGTGAGGCTTACACAAACATACAAACCTACCTCAGTGCAAACTCATCTCAAAGTGCCAAAAGGCTCAAAGCTGAAGTTGTCGAAGATAGCCAAACCCCACTAGTGCTAAGCATGGATGACAATGAAGAGATCACTGATGAGTTCAAAGGGGTCAAAGTTTGGTGGACTGCGAGCAAAAGCACCATCAATCCACAGCCTTCCTTCTCATATTATCCACCATCAGATGCTAAAAGGTATTACAAGCTCACCTTTCACAAGAGTGACCGTGATCTGATCACCATGTCTTACATCAAACATGTCTTGGAAGAGGGAAGGGAGATTTCCATGAGAAACAGGCAATTGAAGCTTTACACCAACAATGCTAGTAGTGGTTGGCATGGTTACAAATCATCAAAGTGGAGCCATGTGATCTTTGAGCACCCTTCAACGTTTGAGACTCTTGCAATGGAGGAAAAGAAGAAGGAAGAGATCATAAAGGACCTTGTCAAATTCAAAGGTGGAAAGGAGTACTATTCAAAGATTGGTAAGGCTTGGAAGAGGGGTTATTTGTTATATGGTCCTCCAGGAACTGTGAAGGTTAACACTGAGCTACGAAAGCTTCTTATTGAAACGCCAAGTAAATCGATCATGGTGATTGAGCATATCGATTGCTCTCTTGATCTTACTGGCCAAAGGAAGAAGAAAAAGGAGAAAGATGATGAGGAACCAAAAGATCCTATCAAGAGAGAACAAGAGGAAGAGAACAAGGGAAGCAAGGTGACTTTTTCTGGGCTATTGAATTTCATTGATGGGATTTGGTCAGCATGTGGAGGGGAGAGGATCATCATATTCACAACAAATTTTGTGGACAAGCTTGATCCTGCTTTGATTAGGAGAGGAAGGATAGACAAGCACATAGAGTTGTCATATTGTGGCTATGAAGCATTCAAGGTGCTTGCAAAGAACTACTTGGATGTTGAGTCCCACCAATTGTTTGCCAGGATTGGGAATTTGTTGCAAGAGACCAATATGACACCTGTTGATGTTGCCGAGAACCTGATGCCAAAGTCTGTGAATGAGGATGCAGAGGATTGCTTGCAGAATTTGATTAAGGCTCTGGAGAAGGCCAAGGAGGAAGCAAGGAAAAAGGCTGAAGAAGAAGCAAGGTTGAAGGAAGAGAAAGAGAAGGGGGAATCTGCTAATTAG 1377 0.4299 MLGEFWAQMRSLMATTVYVYTVFQRFIPPQLLDRLQAYAKKLTSHFYPYIHIKFPEFSGERLKRSEAYTNIQTYLSANSSQSAKRLKAEVVEDSQTPLVLSMDDNEEITDEFKGVKVWWTASKSTINPQPSFSYYPPSDAKRYYKLTFHKSDRDLITMSYIKHVLEEGREISMRNRQLKLYTNNASSGWHGYKSSKWSHVIFEHPSTFETLAMEEKKKEEIIKDLVKFKGGKEYYSKIGKAWKRGYLLYGPPGTVKVNTELRKLLIETPSKSIMVIEHIDCSLDLTGQRKKKKEKDDEEPKDPIKREQEEENKGSKVTFSGLLNFIDGIWSACGGERIIIFTTNFVDKLDPALIRRGRIDKHIELSYCGYEAFKVLAKNYLDVESHQLFARIGNLLQETNMTPVDVAENLMPKSVNEDAEDCLQNLIKALEKAKEEARKKAEEEARLKEEKEKGESAN* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2536 458 Coils Coil 416 454 - -
Dod02g2536 458 CDD AAA 243 367 - -
Dod02g2536 458 PANTHER BCS1 AAA-TYPE ATPASE 4 256 - -
Dod02g2536 458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 435 IPR027417 -
Dod02g2536 458 Gene3D - 198 257 IPR027417 -
Dod02g2536 458 ProSitePatterns AAA-protein family signature. 337 356 IPR003960 GO:0005524|GO:0016887
Dod02g2536 458 MobiDBLite consensus disorder prediction 289 312 - -
Dod02g2536 458 Pfam ATPase family associated with various cellular activities (AAA) 306 366 IPR003959 GO:0005524|GO:0016887
Dod02g2536 458 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 4 256 - -
Dod02g2536 458 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 254 455 - -
Dod02g2536 458 Gene3D - 258 362 IPR027417 -
Dod02g2536 458 Gene3D - 363 434 - -
Dod02g2536 458 PANTHER BCS1 AAA-TYPE ATPASE 254 455 - -
Dod02g2536 458 Pfam Domain associated at C-terminal with AAA 27 121 IPR025753 -
Dod02g2536 458 MobiDBLite consensus disorder prediction 438 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2536 Dod-Chr2 56113175 56114616 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2536 217 365 Calmodulin-binding Proteins AT3G56690 27.439 1.10e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2536 - - gmx:100787917 667.151