Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2534 ATGGAGTTTGGGTTTGGGAAGGTGTGGTCACACCTAGGCTCAATAACAGCTAGCATTATGTTTGTGTACACCATGTATGAGCGATTCTTCCCGCCCCATCTTCGTACCTATGTTCGAAAATACACATACAGATTCACAAGCCTAATCTCCCCTTACATTGCCATCACCTTCCCCGAGTCCTCAGGTGAGAAACTCAAGCGCAGTGAGGCTTTCACAAACATCCAGACCTACCTCAGTGCTAACTCATCCCAGAGTGCCAGAAGGCTCAAAGCTGAAGTCGTCAAAGATAGCCAAACCCCGCTAGTCCTTAGCATGGATGACGGTGAAGAGATCACTGATGAGTTCAAAGGGGTCAAAGTCTGGTGGTTCTCAAACCACAAAACACGAAATTCACAATCATTTTCATTTTACCCTGCTTCGGATGAGATTAGGTACTTCACTCTTACCTTCCACAGGCGCCACCGTGACCTCATCACTGGCTCATACATCAACTATGTATTGGAAGAAGGAAAAGCCATTTCAACAAGAAACAGGCAGCTGAAGCTGTACACCAACAATCCCAGCAAGGATTGGTACTGGTACGGAAGCACCAAGTGGAGCCACATAGCTTTTGAGCACCCTGCAAGGTTCGAGACCTTGGCAATGGATCCGAAGAAGAAGGAAGAGATCATAAACGACCTTGCCAAGTTCAAGAACGGGAAAGACTACTATGAAAAAATTGGGAAGGCTTGGAAACGTGGGTATCTGCTATTTGGTCCACCTGGGACTGGGAAGTCATCAATGATAGCTGCCATGGCCAATTTCATGAACTATGATGTGTATGATCTTGAGTTGACAACTGTCAAGGAGAACGCTGAGTTAAAGAAGCTTTTCATTGACACAAGTAATAAATCAATCATCGTGATTGAAGACATTGATTGCTCCCTCGATCTTACTGGCCAGAGGAAGAAAAAGAAGGAGAAAGATGAGGATGAGAAAGCCGACGATGCGATAAAGAAAGGAAAATTAGATGAAAAAGATGAGGACAGCAAGGTGACTCTTTCTGGGCTGTTGAATTTCACTGATGGGATTTGGTCAGCATGTGGCGGGGAGAGGATCATAATTTTCACAACAAATTATGTGGACAAGCTTGATCCTGCTTTGATTAGGAGAGGAAGGATGGACATGCACATAGAGATGTCCTATTGTAGGTTTGAAGCTTTTAAGGTGCTTGCAAAGAACTACTTGGATGTTGAGTCCCACAGTTTGTTCCCCATCATTGAGGAGAAGTTGGGGGAAACTGATATGACACCTGCTGATGTTGCTGAGAACCTAATGCCAAAGTCAACTACTGAAGATTCTGACGCTTGCTTGCAGAATTTGGTTAAGTCTCTTGATGTGGCCAAGGAGGAGGCGAAGAAGAAGGCAGAGGAGGAAGCAAAGAAGAAGGCAGAGGAGGAAGAGGCTAAGTTGAAGGTGGAGAAAGAAAAAGAAGTGGTGGCTAAGGAGGAAGAAGTGAAAGCTAGTGAAAAAACTGGAGGTGTGGTGAAAGAGAACGGTGTTGTCCATTGA 1551 0.45 MEFGFGKVWSHLGSITASIMFVYTMYERFFPPHLRTYVRKYTYRFTSLISPYIAITFPESSGEKLKRSEAFTNIQTYLSANSSQSARRLKAEVVKDSQTPLVLSMDDGEEITDEFKGVKVWWFSNHKTRNSQSFSFYPASDEIRYFTLTFHRRHRDLITGSYINYVLEEGKAISTRNRQLKLYTNNPSKDWYWYGSTKWSHIAFEHPARFETLAMDPKKKEEIINDLAKFKNGKDYYEKIGKAWKRGYLLFGPPGTGKSSMIAAMANFMNYDVYDLELTTVKENAELKKLFIDTSNKSIIVIEDIDCSLDLTGQRKKKKEKDEDEKADDAIKKGKLDEKDEDSKVTLSGLLNFTDGIWSACGGERIIIFTTNYVDKLDPALIRRGRMDMHIEMSYCRFEAFKVLAKNYLDVESHSLFPIIEEKLGETDMTPADVAENLMPKSTTEDSDACLQNLVKSLDVAKEEAKKKAEEEAKKKAEEEEAKLKVEKEKEVVAKEEEVKASEKTGGVVKENGVVH* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2534 516 CDD AAA 245 395 - -
Dod02g2534 516 Pfam Domain associated at C-terminal with AAA 30 124 IPR025753 -
Dod02g2534 516 MobiDBLite consensus disorder prediction 465 505 - -
Dod02g2534 516 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 7 499 - -
Dod02g2534 516 PANTHER BCS1 AAA-TYPE ATPASE 7 499 - -
Dod02g2534 516 MobiDBLite consensus disorder prediction 465 516 - -
Dod02g2534 516 Pfam ATPase family associated with various cellular activities (AAA) 249 394 IPR003959 GO:0005524|GO:0016887
Dod02g2534 516 SMART AAA_5 244 397 IPR003593 -
Dod02g2534 516 Gene3D - 392 460 - -
Dod02g2534 516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 445 IPR027417 -
Dod02g2534 516 Coils Coil 451 505 - -
Dod02g2534 516 ProSitePatterns AAA-protein family signature. 365 384 IPR003960 GO:0005524|GO:0016887
Dod02g2534 516 Gene3D - 198 391 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2534 Dod-Chr2 56077851 56095132 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2534 219 393 Calmodulin-binding Proteins AT3G56690 27.322 7.54e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2534 - - pvu:PHAVU_004G024700g 672.544