Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2530 ATGCAGGTTTTTCATGACTGTTCTTTTGTTGCAGATTCGTTGAGATTCACATCTGCCCTTTCAGTTGCGCTAGCAGTTGTTTTTCTTGTCATTGCTGTGGGAATCTCAATTGTCAAGATCATTAGTGGAGGCATTGAGATGCCAAGACTGCTCCCTGTCATTACCGATGTGACATCATTCTTTAAACTGTTCACCGTAGTTCCAGTGTTCGTGACTGCATATATCTGCCACTACAATGTTCACAGCATAGACAATGAACTGGAGGACAACTCACAGATGCAAGGGGTTGTACGCACCGCCCTTGGTCTATGCTCTTCTGTGTACTTGTTGATAAGCTTCTTTGGGTATCTACTATTTGGAGAAGGAACTCTTGATGATGTGCTTGCCAATTTCGATACCGATCTTGGAATTCCTTTCAGTTCTGTGCTCAATGATGCCGTTCGTTTAAGCTATGCTGCACATCTTATGCTTGTCTTTCCAGTTGTCTTCTATCCATTTGTCCCCCCATGCTTCTGTTTGATTCCCTTGCCTGAATGA 537 0.4339 MQVFHDCSFVADSLRFTSALSVALAVVFLVIAVGISIVKIISGGIEMPRLLPVITDVTSFFKLFTVVPVFVTAYICHYNVHSIDNELEDNSQMQGVVRTALGLCSSVYLLISFFGYLLFGEGTLDDVLANFDTDLGIPFSSVLNDAVRLSYAAHLMLVFPVVFYPFVPPCFCLIPLPE* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2530 178 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 11 165 - -
Dod02g2530 178 PANTHER AMINO ACID TRANSPORTER 11 165 - -
Dod02g2530 178 Pfam Transmembrane amino acid transporter protein 12 166 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2530 Dod-Chr2 55797175 55798235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2530 12 165 Amino Acid or Auxin Permease AAAP Family AT5G38820 77.922 7.93e-82 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2530 K14207 - gmx:100795222 238.424