Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2526 ATGGAGTTATTTGGGCAGATATGGTCACAACTAGGCTCAATCATGGCTAGCATAATGTTTGTGTACGCCATGTATGAGCAATTCTTCCCACCTCCTCTCCGCAACTATGTTCGAAAATACACACAAAAACTCACAGGCTATATGTACCCATACATCCTTATCAAATTCCCTGAGTTCTCTGGTGAGAGACTCAAGCGCAGTGAGGCTTACACTGCCATCCAAACCTACCTCAGTTCAACCTCATCCCAAAGCGCCAAAAGGCTCAAAGCTGAAGTTGTCAGAGATAGCCAGACCCCATTAGTTCTCAGCATGGATGACGGTGAAGAGATCACTGATGAGTTCAAAGGGGTTAAAGTTACGTGGTTCTCAAACTACGTAGAACCAAGAACACAGTCATTTTCATTCTATCCTTCTTCAGGTGAGAAGAGGTATTTAACTCTCACATTCCACAGGCGCCATCGTGACCTCATCACTGGCTTTTACATCAACCATGTGTTGGAACAAGGCAAGGCGATTTCAACAAGGAACAGGCAGCTGAAGCTGTACACCAACAATCCCAGCAGGGATTGGCATTGGTACAAAAGCACCAGGTGGAGCCACATAGTGTTTGAGCACCCTGCAAGGTTTGAGACCTTGGCAATGGATCCAAAGAAGAAGGAAGAGATCATAAACGACCTTGTCAAGTTCAAGAATGGGAAAGACTACTATGAGAAGATTGGGAAGGCTTGGAAACGTGGGTATCTGCTGTACGGTCCACCTGGGACTGGGAAGTCCACAATGATAGCTGCCATGGCCAATTTCATGAACTATGATGTGTATGATCTTGAGTTGACAGCTGTCAAGGAGAACACTGAGCTAAGGAGGCTGTTGATTGAAACTGCTAGTAAATCAATCATAGTGATTGAAGACATCGATTGCTCCCTTGATCTTACTGGCCAAAGGAAGAAGAAAGACGAGGAGAAAGATGAAGAAGAGAAAGCCAAAGATGCTATTAAGAAAGGAAGAAGAGGAGAGGAAGAAGGCAGCAAGGTGACTCTTTCTGGGCTATTGAATTTCATTGATGGGATTTGGTCAGCATGTGGAGGGGAGAGGATCATCATTTTCACAACAAACTTTGTGGAAAAGCTTGATCCTGCTTTGATTAGGAGAGGAAGGATGGACAAGCACATTGAGCTGTCATATTGTAGGTTCGAAGCTTTCAAGGTGCTTGCAAAGAACTACTTGGATGTTGAGTCCCACAGTTTGTTCCCCATCATTGAGGAGAAGTTGGGAGAGACTGATATGACACCTGCTGACTGTCGCTGA 1305 0.449 MELFGQIWSQLGSIMASIMFVYAMYEQFFPPPLRNYVRKYTQKLTGYMYPYILIKFPEFSGERLKRSEAYTAIQTYLSSTSSQSAKRLKAEVVRDSQTPLVLSMDDGEEITDEFKGVKVTWFSNYVEPRTQSFSFYPSSGEKRYLTLTFHRRHRDLITGFYINHVLEQGKAISTRNRQLKLYTNNPSRDWHWYKSTRWSHIVFEHPARFETLAMDPKKKEEIINDLVKFKNGKDYYEKIGKAWKRGYLLYGPPGTGKSTMIAAMANFMNYDVYDLELTAVKENTELRRLLIETASKSIIVIEDIDCSLDLTGQRKKKDEEKDEEEKAKDAIKKGRRGEEEGSKVTLSGLLNFIDGIWSACGGERIIIFTTNFVEKLDPALIRRGRMDKHIELSYCRFEAFKVLAKNYLDVESHSLFPIIEEKLGETDMTPADCR* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2526 434 MobiDBLite consensus disorder prediction 314 334 - -
Dod02g2526 434 Gene3D - 391 433 - -
Dod02g2526 434 SMART AAA_5 243 396 IPR003593 -
Dod02g2526 434 Pfam ATPase family associated with various cellular activities (AAA) 248 393 IPR003959 GO:0005524|GO:0016887
Dod02g2526 434 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 6 433 - -
Dod02g2526 434 CDD AAA 244 394 - -
Dod02g2526 434 ProSitePatterns AAA-protein family signature. 364 383 IPR003960 GO:0005524|GO:0016887
Dod02g2526 434 PANTHER BCS1 AAA-TYPE ATPASE 6 433 - -
Dod02g2526 434 Pfam Domain associated at C-terminal with AAA 29 123 IPR025753 -
Dod02g2526 434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 433 IPR027417 -
Dod02g2526 434 Gene3D - 199 390 IPR027417 -
Dod02g2526 434 Coils Coil 310 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2526 Dod-Chr2 55778750 55780179 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2526 218 392 Calmodulin-binding Proteins AT3G56690 28.177 1.88e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2526 - - pvu:PHAVU_004G024700g 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1686 05 42150025 42151895 Dod02g2526 02 55778750 55780179 ECH
Dod02g2526 02 55778750 55780179 Dod02g2526 02 55778750 55780179 ECH