Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2501 ATGGCAGCTTACATATTCACGGTGTCACAAAACGGAAGCGGTGATTTCCAAACGGTGCAAGAAGCGATCGACGCCGTGCCGCTCGGCAACACTCGCCGGACGGTCATTCGGGTTTCGCCGGGAATCTACCGGCAGCCGGTGTACGTTCCAAAAACCAAGAATTTCATCACGCTTGCTGGTCTTCGCCCTGAGGATACCGTCCTTACCTGGAACAACACCGCCACCAAAATCGATCACCACCAACCTGCAAGGCTGATAGGGACTGGAACGTTCGGTTGTGGAAGTACCATCGTGGAAGGGGAGGACTTTATCGCTGAGAATATTACTTTTGAGAATTCTGCCCCTGAGGGCTCAGGACAAGCAGTGGCAATTAGAGTAACAGCTGATCGGTGTGCCTTCTACAATTGCAGGTTCCTCGGATGGCAGGACACACTGTACTTGCATTACGGCAAACAATATTTGAAAGATTGCTATGTTGCAGGAAGTGTGGACTTCATCTTTGGCAATAGCACTGCTCTTTTGGAGCACTGTCATATCCACTGCAAGTCTACAGGGTTCATAACTGCACAGAGCAGAAAATCTTCACAGGAAACAACTGGTTATGTATTCTTGAGATGTGTTATCACAGGTAATGGAGGAAATTCGTATGCATATCTTGGACGGCCATGGGGACCTTTTGGAAGGGTGGTCTTTGCGTACACTTACATGGATCAATGTATAAGGCATGCTGGCTGGGATAACTGGGGGAAGGTTGAGAATGAGAGAAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCTGGTTGCTGTCCATCCAAACGAGTAACATGGTGTAGAGAATTGGTGGATGAAGAAGCAGAGCAGTTCCTCATGCATTCTTTCATTGATCCAGATCCAGAGAGACCTTGGCTTGCTCAAAGAATGGCCTTGAGGATTCCATATTCCGCTTAG 951 0.4805 MAAYIFTVSQNGSGDFQTVQEAIDAVPLGNTRRTVIRVSPGIYRQPVYVPKTKNFITLAGLRPEDTVLTWNNTATKIDHHQPARLIGTGTFGCGSTIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYVAGSVDFIFGNSTALLEHCHIHCKSTGFITAQSRKSSQETTGYVFLRCVITGNGGNSYAYLGRPWGPFGRVVFAYTYMDQCIRHAGWDNWGKVENERSACFYEYRCFGPGCCPSKRVTWCRELVDEEAEQFLMHSFIDPDPERPWLAQRMALRIPYSA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2501 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Dod02g2501 316 Gene3D - 2 310 IPR012334 -
Dod02g2501 316 PANTHER PECTINESTERASE 1 315 - -
Dod02g2501 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 315 - -
Dod02g2501 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
Dod02g2501 316 SUPERFAMILY Pectin lyase-like 2 302 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2501 Dod-Chr2 55271862 55276293 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2501 5 309 Carbohydrate Esterase AT5G47500 38.217 1.45e-71 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2501 K01051 - gmx:100786786 634.024