Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2500 ATGAGAGGTGAACGAGCACCGAGATCTGAATTTGTTTATAGTAATACTAGCTCAAAGTTTATTGGTTTATTAGAGGATAAGCTTGAATCTGCTAAAGCTGAGATGGGTGAGGTGAAGGAAGAAAATGAAAGATTGAAAATGATGCTAGAGCGAGTTGAAAAAGACTACCACTCTCTTCAATTGCGTTTCTTTGATATCCTCCAAGGAGAAACTTCAAATAAAGGTGTACAAGACTCAGCTACAACTTCCCCTGATGAAGTGGAAGGGCATAAACTTGTCTCACTTTGTCTTGGAACAAGTCCAAGGGAGCCTAAAAAGGAAGGAGTACTAATGGGTAACTCTAGCAAGCCTAAAGAAAATGAAGATTTGGAAGCCAACCTCACACTTGGTTTGGACTCCAAAAGTCTCTTGTCAATGGAGTTGGATTCTGATCTGAGCCCCATGAACAGCTCAGAAGAACTAAAGGAAGCAGCAGAAGCAAGGGGAGCATGTTCACCAAATAAGTCAGCAAGGACCAAAGATGACAGCGATGAAATTTCAGAGCACACACCCTCCAAAAGGGCTAGAGTTTGTGTAAGAGCTAGATGTGACACTCCCACGATGAATGATGGATGCCAGTGGAGGAAATATGGACAGAAGATAGCAAAAGCAAATCCATCATGTCCAAGGGCATACTATCGTTGCACAGTTGCTCCAGCATGCCCAGTTAGGAAACAAGTCTCAGGCGCTGCACCTTTTGGAAATGCTCCTGCACTATTCAGTGGTCTGAATTTCAGTCATTTGGATCAATCAAGAGCAAAACAGGCCTTCTTACCAAACACTGGCTCACAATTGTTCCCAACTATCACTCTAGACCTCACATCTAATTCACCCCCCTCATCAAACCGTGTCCATCTTTTGCCTTCAAGCTTTGCTTCAAGCCCAAGATTCCATCCATTAAGCCTAAGCTTCAGCTCCCCAGAACCCAACACCCCACCATCCTTCTGGGTTAAGGGACTCCATAATTATGGCAGTGTGCCTATTGAGAAAACTCATACTAGTCCAGTTAATCTAGGATATCAATTTGAAGAACATTTCTATCAACACTGCATCAAGAACCAAACTCCTTTCAAAGAGGCTTTGGCAGAAACACTGACCAAAGCAATTAGTACTGACCCGAGTTTTCGCTCTGCGATAGCTGCTGCAGTTTCATCTATAGAGAGGCAAGGATCCACAATTAGGAACCAAGGCGGAGGGGAGATTTTAGGTTCAGGCTTGAGCTTGAAACTAGGGGACAATCCTCAATTCAGTTCTTCCATTAATCCCTTTAACCAAAAGGGGAAACTTCAAGTTCTCAACAGGTCATCATCAACTTCAAGTTCTCAGGGTGGAAACTTCATGCTTCTCCAACCTCCAAGGCCATTTTCTCTCTCCAAGAGTAGCAGCTCTTCCTCCAACATTGATCACATTAACCATTGGGTTCAATAA 1467 0.4335 MRGERAPRSEFVYSNTSSKFIGLLEDKLESAKAEMGEVKEENERLKMMLERVEKDYHSLQLRFFDILQGETSNKGVQDSATTSPDEVEGHKLVSLCLGTSPREPKKEGVLMGNSSKPKENEDLEANLTLGLDSKSLLSMELDSDLSPMNSSEELKEAAEARGACSPNKSARTKDDSDEISEHTPSKRARVCVRARCDTPTMNDGCQWRKYGQKIAKANPSCPRAYYRCTVAPACPVRKQVSGAAPFGNAPALFSGLNFSHLDQSRAKQAFLPNTGSQLFPTITLDLTSNSPPSSNRVHLLPSSFASSPRFHPLSLSFSSPEPNTPPSFWVKGLHNYGSVPIEKTHTSPVNLGYQFEEHFYQHCIKNQTPFKEALAETLTKAISTDPSFRSAIAAAVSSIERQGSTIRNQGGGEILGSGLSLKLGDNPQFSSSINPFNQKGKLQVLNRSSSTSSSQGGNFMLLQPPRPFSLSKSSSSSSNIDHINHWVQ* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2500 488 MobiDBLite consensus disorder prediction 98 120 - -
Dod02g2500 488 SMART WRKY_cls 201 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g2500 488 MobiDBLite consensus disorder prediction 444 488 - -
Dod02g2500 488 MobiDBLite consensus disorder prediction 168 184 - -
Dod02g2500 488 SUPERFAMILY WRKY DNA-binding domain 194 242 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod02g2500 488 Gene3D WRKY domain 188 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod02g2500 488 MobiDBLite consensus disorder prediction 143 184 - -
Dod02g2500 488 MobiDBLite consensus disorder prediction 444 460 - -
Dod02g2500 488 Coils Coil 21 62 - -
Dod02g2500 488 Pfam WRKY DNA -binding domain 202 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g2500 488 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 26 240 IPR044810 GO:0003700
Dod02g2500 488 ProSiteProfiles WRKY domain profile. 196 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g2500 488 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 252 479 IPR044810 GO:0003700
Dod02g2500 488 MobiDBLite consensus disorder prediction 467 488 - -
Dod02g2500 488 PANTHER WRKY TRANSCRIPTION FACTOR 72-RELATED 26 240 - -
Dod02g2500 488 PANTHER WRKY TRANSCRIPTION FACTOR 72-RELATED 252 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2500 Dod-Chr2 55228950 55232431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2500 35 440 WRKY Transcription Factor Family AT5G15130 35.597 1.96e-59 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod02g2500 WRKY 2.4e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2500 - - lang:109353541 558.525